RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PDCD6O75340 191 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 CRTAPO75718 401 aaPredicted RBP5.91□□□□□ -1.46
NEK3-201ENST00000550331 RGS11O94810 467 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 NDUFA3O95167 84 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 MAS1P04201 325 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 CD1AP06126 327 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 CAPGP40121 348 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 RAB9AP51151 201 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 CRIP2P52943 208 aaPredicted RBP5.91□□□□□ -1.46
NEK3-201ENST00000550331 GNMTQ14749 295 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 C5orf64Q2M2E5 130 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 C6orf141Q5SZD1 244 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 FAM27D1Q5T7N8 215 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 SIGIRRQ6IA17 410 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ZNF429Q86V71 674 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 TCTEX1D1Q8N7M0 179 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ZFP41Q8N8Y5 198 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 MINDY2Q8NBR6 621 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 SETD9Q8NE22 299 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 MRPL30Q8TCC3 161 aaKnown RBP5.91□□□□□ -1.46
NEK3-201ENST00000550331 GALMQ96C23 342 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 RBMXL1Q96E39 390 aaKnown RBP5.91□□□□□ -1.46
NEK3-201ENST00000550331 DERL3Q96Q80 235 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 YPEL2Q96QA6 119 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ASCL2Q99929 193 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 MRPL20Q9BYC9 149 aaKnown RBP5.91□□□□□ -1.46
NEK3-201ENST00000550331 ANKRD60Q9BZ19 345 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 CST11Q9H112 138 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 BANF2Q9H503 90 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 PALMDQ9NP74 551 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ISYNA1Q9NPH2 558 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 PARP11Q9NR21 331 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 KIAA1456Q9P272 454 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ERGIC3Q9Y282 383 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 WSB1Q9Y6I7 421 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 SAA2-SAA4A0A096LPE2 208 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 A0A1W2PPK0 400 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 UBE2QL1A1L167 161 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 OVOL1O14753 267 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 LY86O95711 162 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 UBBP0CG47 229 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 SAA2P0DJI9 122 aaPredicted RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 LYL1P12980 280 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 MAPK3P27361 379 aaPredicted RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 BLVRBP30043 206 aaPredicted RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 PPP1CCP36873 323 aaKnown RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 GNB1P62873 340 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 HMGN3Q15651 99 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 C19orf54Q5BKX5 351 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 TTC23Q5W5X9 447 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 ZNF660Q6AZW8 331 aaPredicted RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 LIN54Q6MZP7 749 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 OR2AK2Q8NG84 335 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 OR52L2PQ8NGH6 319 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 RITA1Q96K30 269 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 IFI27L2Q9H2X8 130 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 C8orf4Q9NR00 106 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 CNOT2Q9NZN8 540 aaKnown RBP5.9□□□□□ -1.46
NEK3-201ENST00000550331 PIPOXQ9P0Z9 390 aa5.9□□□□□ -1.46
NEK3-201ENST00000550331 HERC2O95714 4834 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 EFCAB10A6NFE3 127 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 OR5H14A6NHG9 310 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 LINC01619G3V211 115 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 RAB29O14966 203 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 ARPC1BO15143 372 aaKnown RBP5.89□□□□□ -1.47
NEK3-201ENST00000550331 SAP30O75446 220 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 LGALS1P09382 135 aaKnown RBP5.89□□□□□ -1.47
NEK3-201ENST00000550331 CELP19835 753 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 CNTFRP26992 372 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 OR3A3P47888 321 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 WNT4P56705 351 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 CX3CL1P78423 397 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 ST3GAL4Q11206 333 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 LRRC36Q1X8D7 754 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 PYHIN1Q6K0P9 492 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 OR6Q1Q8NGQ2 317 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 DCUN1D4Q92564 292 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 GGHQ92820 318 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 FAM46BQ96A09 425 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 RCHY1Q96PM5 261 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 NEDD4LQ96PU5 975 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 OR5B12Q96R08 314 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 TOLLIPQ9H0E2 274 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 GHITMQ9H3K2 345 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 ABRACLQ9P1F3 81 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 STEAP1Q9UHE8 339 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 SLC23A1Q9UHI7 598 aa5.89□□□□□ -1.47
NEK3-201ENST00000550331 FOXA2Q9Y261 457 aaPredicted RBP5.89□□□□□ -1.47
NEK3-201ENST00000550331 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 PNMA8CA0A1B0GUJ8 204 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 A0A1W2PN81 502 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 ITGB1BP1O14713 200 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 RRHO14718 337 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 MYL12BO14950 172 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 SOX15O60248 233 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 RBBP9O75884 186 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 BAG2O95816 211 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 NAPSAO96009 420 aa5.88□□□□□ -1.47
NEK3-201ENST00000550331 HSPB1P04792 205 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms