RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 DENRO43583 198 aaKnown RBP1.82□□□□□ -2.12
BRCA2-202ENST00000470094 SH2D1AO60880 128 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 IFNA6P05013 189 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 ATP5G1P05496 136 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 CALB1P05937 261 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 MYL12AP19105 171 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 CXCL2P19875 107 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 PRPS1L1P21108 318 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 CRABP2P29373 138 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 OR1E2P47887 323 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 FOXA1P55317 472 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 AP3S2P59780 193 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 CXCR4P61073 352 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 PPP1R1AQ13522 171 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 MAPK14Q16539 360 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 AKIRIN2Q53H80 203 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 C10orf91Q5T1B1 145 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 LCN8Q6JVE9 175 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 CCDC112Q8NEF3 446 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 OR11G2Q8NGC1 345 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 OR8K1Q8NGG5 319 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 ERMNQ8TAM6 284 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 RAB8BQ92930 207 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 TLCD1Q96CP7 247 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 PRAP1Q96NZ9 151 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 GNB1LQ9BYB4 327 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 MAP1LC3AQ9H492 121 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 EMC3Q9P0I2 261 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 SLC23A2Q9UGH3 650 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 C3orf18Q9UK00 162 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 ZNF443Q9Y2A4 671 aaPredicted RBP1.82□□□□□ -2.12
BRCA2-202ENST00000470094 LINC00588Q9Y4M8 146 aa1.82□□□□□ -2.12
BRCA2-202ENST00000470094 TRBV24-1A0A075B6N3 115 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 A0A1W2PQL4 384 aaPredicted RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 TMEM114B3SHH9 223 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 COPEO14579 308 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 SULT1B1O43704 296 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 STK16O75716 305 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 NSA2O95478 260 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 CRYBA1P05813 215 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 OR13C7P0DN81 318 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 HIST1H1EP10412 219 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 ORM2P19652 201 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 CXCL3P19876 107 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 CDK2P24941 298 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 RPL12P30050 165 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 HSPA9P38646 679 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 SLCO1A2P46721 670 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 LSM6P62312 80 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 DEFA6Q01524 100 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 DHRS2Q13268 280 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 EBPQ15125 230 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 SLC9A3R2Q15599 337 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 OR8G1Q15617 311 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 TAF9Q16594 264 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 SPOPLQ6IQ16 392 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 LRRC34Q8IZ02 419 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 KRT222Q8N1A0 295 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 C16orf78Q8WTQ4 265 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 HIST1H2BAQ96A08 127 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 TESCQ96BS2 214 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 ABHD14BQ96IU4 210 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 TIPINQ9BVW5 301 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 EIF5A2Q9GZV4 153 aaKnown RBP1.81□□□□□ -2.12
BRCA2-202ENST00000470094 OR51B6Q9H340 312 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 KMT2EQ8IZD2 1858 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 NPATQ14207 1427 aa1.81□□□□□ -2.12
BRCA2-202ENST00000470094 IGKV1D-37A0A075B6S9 117 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 C4orf51C9J302 202 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 KCNK1O00180 336 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 LECT2O14960 151 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 EEF1E1O43324 174 aaKnown RBP1.8□□□□□ -2.12
BRCA2-202ENST00000470094 IGHMP01871 453 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 TCRBP04435 133 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 IFNA16P05015 189 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 IL3P08700 152 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 HRES1P13985 223 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ZNF708P17019 499 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 COL8A2P25067 703 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 GABRA3P34903 492 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 IDH3GP51553 393 aaPredicted RBP1.8□□□□□ -2.12
BRCA2-202ENST00000470094 LINC00313P59037 77 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ARF6P62330 175 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 REEP5Q00765 189 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 FABP5Q01469 135 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 BSPH1Q075Z2 132 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 TMEM267Q0VDI3 215 aaPredicted RBP1.8□□□□□ -2.12
BRCA2-202ENST00000470094 TSPAN31Q12999 210 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 OR2F1Q13607 317 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 APOFQ13790 326 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ZNF141Q15928 474 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 HIST3H3Q16695 136 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 SPIN3Q5JUX0 258 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 AMMECR1LQ6DCA0 310 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ATP5L2Q7Z4Y8 100 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 LYPD6Q86Y78 171 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 ZFAND2AQ8N6M9 145 aa1.8□□□□□ -2.12
BRCA2-202ENST00000470094 NATD1Q8N6N6 113 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms