RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 PTX4Q96A99 478 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 RAB3CQ96E17 227 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 RITA1Q96K30 269 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 CABLES2Q9BTV7 478 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 SLC23A1Q9UHI7 598 aa12.17□□□□□ -0.46
ATG4B-202ENST00000400771 NCBP2LA6PVI3 153 aaKnown RBP12.16□□□□□ -0.46
ATG4B-202ENST00000400771 NOTOA8MTQ0 251 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 CLEC2LP0C7M8 214 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 GNB3P16520 340 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 GADD45AP24522 165 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 CFHR3Q02985 330 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 NEDD8Q15843 81 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 ETV3LQ6ZN32 361 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 OR4F17Q8NGA8 305 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 OR8H1Q8NGG4 311 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 CHPT1Q8WUD6 406 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 C11orf54Q9H0W9 315 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-202ENST00000400771 ELF5Q9UKW6 265 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-202ENST00000400771 MGAT4AQ9UM21 535 aa12.16□□□□□ -0.46
ATG4B-202ENST00000400771 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-202ENST00000400771 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 ACTBP60709 375 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-202ENST00000400771 SFXN4Q6P4A7 337 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 FAM131AQ6UXB0 335 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 C18orf65Q6ZTR6 163 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 LGALS14Q8TCE9 139 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 CHCHD6Q9BRQ6 235 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 CENPOQ9BU64 300 aa12.15□□□□□ -0.46
ATG4B-202ENST00000400771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATG4B-202ENST00000400771 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-202ENST00000400771 TNCP24821 2201 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 IGKV1D-8A0A087WSZ0 117 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 TCRBV4S1A1TA0A5B7 111 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 TRDCB7Z8K6 153 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 H0YJW9 148 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 AP4M1O00189 453 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 RAB29O14966 203 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 NDUFA3O95167 84 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 CD3GP09693 182 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 CT45A6P0DMU7 189 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 CT45A5P0DMU8 189 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 CT45A7P0DMV0 189 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
ATG4B-202ENST00000400771 SDC2P34741 201 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 RANBP1P43487 201 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 MMDQ15546 238 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-202ENST00000400771 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 SLC25A38Q96DW6 304 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 ZNF230Q9UIE0 474 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-202ENST00000400771 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 SSR3Q9UNL2 185 aa12.14□□□□□ -0.47
ATG4B-202ENST00000400771 A0A075B6Q4 140 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 FABP7O15540 132 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 DIRAS3O95661 229 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 CD36P16671 472 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 ZBTB25P24278 435 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 TGFBR1P36897 503 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 CEACAM6P40199 344 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
ATG4B-202ENST00000400771 NDPQ00604 133 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 Q6ZS49 121 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 FOXRED2Q8IWF2 684 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 KCTD7Q96MP8 289 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 RDH8Q9NYR8 311 aa12.13□□□□□ -0.47
ATG4B-202ENST00000400771 TRBV6-7A0A0A0MS04 114 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 NBR2O15453 112 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 HLA-DRB1P01911 266 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 IGF1P05019 195 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 GSTT2P0CG29 244 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 GSTT2BP0CG30 244 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 LINC00205P59089 165 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 MXD1Q05195 221 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 NPBQ8NG41 125 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 OR5AN1Q8NGI8 311 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 OR5H6Q8NGV6 325 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
ATG4B-202ENST00000400771 IGHV7-81A0A0B4J1V7 117 aa12.11□□□□□ -0.47
ATG4B-202ENST00000400771 LOC100506127A0A0U1RQW1 187 aa12.11□□□□□ -0.47
ATG4B-202ENST00000400771 HSPA12AO43301 675 aa12.11□□□□□ -0.47
ATG4B-202ENST00000400771 PF4V1P10720 104 aa12.11□□□□□ -0.47
ATG4B-202ENST00000400771 SOX6P35712 828 aa12.11□□□□□ -0.47
ATG4B-202ENST00000400771 KIR2DS1Q14954 304 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms