RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 LIN7CQ9NUP9 197 aaKnown RBP26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 STEAP1Q9UHE8 339 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 MGAT4AQ9UM21 535 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 TRDV1A0A1B0GX56 115 aa26.16■■□□□ 1.78
SSSCA1-205ENST00000527920 Q6ZPA2 131 aa26.16■■□□□ 1.78
SSSCA1-205ENST00000527920 CHPT1Q8WUD6 406 aa26.16■■□□□ 1.78
SSSCA1-205ENST00000527920 CHMP1AQ9HD42 196 aaPredicted RBP26.16■■□□□ 1.78
SSSCA1-205ENST00000527920 TCRBV4S1A1TA0A5B7 111 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 CLDN12P56749 244 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 C2orf76Q3KRA6 126 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 Q8N9W7 124 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 OR56B1Q8NGI3 324 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 PLSCR3Q9NRY6 295 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 AK3Q9UIJ7 227 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 NOTCH3Q9UM47 2321 aa26.15■■□□□ 1.78
SSSCA1-205ENST00000527920 PSMB11A5LHX3 300 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 NCBP2LA6PVI3 153 aaKnown RBP26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 MYL9P24844 172 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 TMEM50BP56557 158 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 LSAMPQ13449 338 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 SAMD5Q5TGI4 173 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 C5orf24Q7Z6I8 188 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 SLC35E3Q7Z769 313 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 ODF3L1Q8IXM7 274 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 OR2AK2Q8NG84 335 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 FCGR1BQ92637 280 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 ABCG5Q9H222 651 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 C12orf4Q9NQ89 552 aa26.14■■□□□ 1.78
SSSCA1-205ENST00000527920 ZNF736B4DX44 427 aaPredicted RBP26.13■■□□□ 1.77
SSSCA1-205ENST00000527920 C10orf99Q6UWK7 81 aa26.13■■□□□ 1.77
SSSCA1-205ENST00000527920 FOXRED2Q8IWF2 684 aa26.13■■□□□ 1.77
SSSCA1-205ENST00000527920 SPARTQ8N0X7 666 aa26.13■■□□□ 1.77
SSSCA1-205ENST00000527920 RAB22AQ9UL26 194 aa26.13■■□□□ 1.77
SSSCA1-205ENST00000527920 SERPINE3A8MV23 424 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 VEGFCP49767 419 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 KPRPQ5T749 579 aaPredicted RBP26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 FAM71F2Q6NXP2 309 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 ZNF833PQ6ZTB9 187 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 IL1F10Q8WWZ1 152 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 S1PR3Q99500 378 aa26.12■■□□□ 1.77
SSSCA1-205ENST00000527920 PLXNB1O43157 2135 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 SHISA3A0PJX4 238 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 IFITM5A6NNB3 132 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 HES5Q5TA89 166 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 C1QL4Q86Z23 238 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 COMMD1Q8N668 190 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 ARHGAP5-AS1Q96IT6 56 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 IFI27L2Q9H2X8 130 aa26.11■■□□□ 1.77
SSSCA1-205ENST00000527920 TMEM272A0A1B0GTI8 110 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 A0A1W2PRX2 142 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 ITGB1BP1O14713 200 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 GPR12P47775 334 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 BEAN1Q3B7T3 259 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 FAM71E2Q8N5Q1 922 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 SETD6Q8TBK2 473 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 NOL4LQ96MY1 436 aaPredicted RBP26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 PECRQ9BY49 303 aa26.1■■□□□ 1.77
SSSCA1-205ENST00000527920 G3V4G9 280 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 AP4M1O00189 453 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 HLA-DRB3P79483 266 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 WFDC9Q8NEX5 89 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 NABP2Q9BQ15 211 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 HDHD3Q9BSH5 251 aaPredicted RBP26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 GHITMQ9H3K2 345 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 Q9N2K0 584 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 SLC23A1Q9UHI7 598 aa26.09■■□□□ 1.77
SSSCA1-205ENST00000527920 PF4V1P10720 104 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 RAB3BP20337 219 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 FGF9P31371 208 aaPredicted RBP26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 OR10A3P58181 314 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 SLC35B1P78383 322 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 PLAC9Q5JTB6 97 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 ZNF329Q86UD4 541 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 STPG2Q8N412 459 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 RASL11BQ9BPW5 248 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 CMSS1Q9BQ75 279 aaKnown RBP26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 MRPL20Q9BYC9 149 aaKnown RBP26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 PIPOXQ9P0Z9 390 aa26.08■■□□□ 1.77
SSSCA1-205ENST00000527920 SAA2-SAA4A0A096LPE2 208 aa26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 SAA2P0DJI9 122 aaPredicted RBP26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 RAB6AP20340 208 aa26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 PSMB9P28065 219 aa26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 C22orf42Q6IC83 251 aa26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 GON7Q9BXV9 100 aa26.07■■□□□ 1.76
SSSCA1-205ENST00000527920 RAB29O14966 203 aa26.06■■□□□ 1.76
SSSCA1-205ENST00000527920 PTX4Q96A99 478 aa26.06■■□□□ 1.76
SSSCA1-205ENST00000527920 ZNF580Q9UK33 172 aa26.06■■□□□ 1.76
SSSCA1-205ENST00000527920 ZBTB25P24278 435 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 OR3A3P47888 321 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 F2RL1P55085 397 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 PLA2G7Q13093 441 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 KHDC1LQ5JSQ8 128 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 ZNF773Q6PK81 442 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 EDARADDQ8WWZ3 215 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 RAB3CQ96E17 227 aa26.05■■□□□ 1.76
SSSCA1-205ENST00000527920 ST8SIA5O15466 376 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 SLC6A1P30531 599 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 SOX6P35712 828 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 ZNF251Q9BRH9 671 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 AGMATQ9BSE5 352 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms