RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 WIPF1O43516 503 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 MOSP00540 346 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 PPP1CCP36873 323 aaKnown RBP19.53■□□□□ 0.72
PVT1-204ENST00000517525 HNF4GQ14541 408 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 ODF3L1Q8IXM7 274 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 PTX4Q96A99 478 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 PLSCR3Q9NRY6 295 aa19.53■□□□□ 0.72
PVT1-204ENST00000517525 RRP15Q9Y3B9 282 aaKnown RBP19.53■□□□□ 0.72
PVT1-204ENST00000517525 IGHG2P01859 326 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 RAB3BP20337 219 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 RAB6AP20340 208 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 VEGFCP49767 419 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 OR10A3P58181 314 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 HES5Q5TA89 166 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 C5orf24Q7Z6I8 188 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 LYG1Q8N1E2 194 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 ARHGAP5-AS1Q96IT6 56 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 PECRQ9BY49 303 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 CHMP1AQ9HD42 196 aaPredicted RBP19.52■□□□□ 0.72
PVT1-204ENST00000517525 C12orf4Q9NQ89 552 aa19.52■□□□□ 0.72
PVT1-204ENST00000517525 IGHV3-72A0A0B4J1Y9 119 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 SH2D7A6NKC9 451 aaPredicted RBP19.51■□□□□ 0.71
PVT1-204ENST00000517525 PSMB9P28065 219 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 KCTD21Q4G0X4 260 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 TCTEX1D4Q5JR98 221 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 PLAC9Q5JTB6 97 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 HIST2H2BDQ6DRA6 164 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 C22orf42Q6IC83 251 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 FAM71F2Q6NXP2 309 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 ZNF833PQ6ZTB9 187 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 OR4F17Q8NGA8 305 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 OR4F4Q96R69 305 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 GHITMQ9H3K2 345 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 Q9N2K0 584 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 LIN7CQ9NUP9 197 aaKnown RBP19.51■□□□□ 0.71
PVT1-204ENST00000517525 STUB1Q9UNE7 303 aa19.51■□□□□ 0.71
PVT1-204ENST00000517525 LSAMPQ13449 338 aa19.5■□□□□ 0.71
PVT1-204ENST00000517525 C9orf152Q5JTZ5 239 aa19.5■□□□□ 0.71
PVT1-204ENST00000517525 TPRA1Q86W33 373 aa19.5■□□□□ 0.71
PVT1-204ENST00000517525 Q8N9W7 124 aa19.5■□□□□ 0.71
PVT1-204ENST00000517525 OR2AK2Q8NG84 335 aa19.5■□□□□ 0.71
PVT1-204ENST00000517525 TXNL4BQ9NX01 149 aaKnown RBP19.5■□□□□ 0.71
PVT1-204ENST00000517525 ZNF736B4DX44 427 aaPredicted RBP19.49■□□□□ 0.71
PVT1-204ENST00000517525 HLA-DRB3P79483 266 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 NSUN5P1Q3KNT7 163 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 NR2C2APQ86WQ0 139 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 OR4X2Q8NGF9 303 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 CHPT1Q8WUD6 406 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 CMSS1Q9BQ75 279 aaKnown RBP19.49■□□□□ 0.71
PVT1-204ENST00000517525 HDHD3Q9BSH5 251 aaPredicted RBP19.49■□□□□ 0.71
PVT1-204ENST00000517525 ABCG5Q9H222 651 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 IFI27L2Q9H2X8 130 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 KCNK7Q9Y2U2 307 aa19.49■□□□□ 0.71
PVT1-204ENST00000517525 RAB27BO00194 218 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 PLA2G7Q13093 441 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 IL1F10Q8WWZ1 152 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 S1PR3Q99500 378 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 AGMATQ9BSE5 352 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 PIPOXQ9P0Z9 390 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 SLC23A1Q9UHI7 598 aa19.48■□□□□ 0.71
PVT1-204ENST00000517525 TSSC4Q9Y5U2 329 aaPredicted RBP19.48■□□□□ 0.71
PVT1-204ENST00000517525 NOTOA8MTQ0 251 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 SLC35E3Q7Z769 313 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 FAM71E2Q8N5Q1 922 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 OR10R2Q8NGX6 335 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 RAB3CQ96E17 227 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 NABP2Q9BQ15 211 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 ZNF251Q9BRH9 671 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 TOLLIPQ9H0E2 274 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 ZNF580Q9UK33 172 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 SSR3Q9UNL2 185 aa19.47■□□□□ 0.71
PVT1-204ENST00000517525 PSMB11A5LHX3 300 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 METTL21EPA6NDL7 271 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 NCBP2LA6PVI3 153 aaKnown RBP19.46■□□□□ 0.71
PVT1-204ENST00000517525 RAB29O14966 203 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 DIRAS3O95661 229 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 ZBTB25P24278 435 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 DEFA6Q01524 100 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 COMMD1Q8N668 190 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 SETD6Q8TBK2 473 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 EDARADDQ8WWZ3 215 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 R3HDM4Q96D70 268 aa19.46■□□□□ 0.71
PVT1-204ENST00000517525 NOTCH3Q9UM47 2321 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 SAA2-SAA4A0A096LPE2 208 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 TCRBV4S1A1TA0A5B7 111 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 TRDCB7Z8K6 153 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 MFNGO00587 321 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 KCNAB3O43448 404 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 SAA2P0DJI9 122 aaPredicted RBP19.45■□□□□ 0.7
PVT1-204ENST00000517525 GADD45AP24522 165 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 GPR12P47775 334 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 MOGAT2Q3SYC2 334 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 FOXRED2Q8IWF2 684 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 WFDC9Q8NEX5 89 aa19.45■□□□□ 0.7
PVT1-204ENST00000517525 MRPL20Q9BYC9 149 aaKnown RBP19.45■□□□□ 0.7
PVT1-204ENST00000517525 SERPINE3A8MV23 424 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 AP4M1O00189 453 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 SCTP09683 121 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 OR3A3P47888 321 aa19.44■□□□□ 0.7
PVT1-204ENST00000517525 ARL6IP1Q15041 203 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms