RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 LDLRAD4O15165 306 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 MOSP00540 346 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 VEGFCP49767 419 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 OR10A3P58181 314 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 CD83Q01151 205 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 DEFA6Q01524 100 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 C22orf42Q6IC83 251 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 ZNF880Q6PDB4 577 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 Q6ZPA2 131 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 OR8H1Q8NGG4 311 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 ARHGAP5-AS1Q96IT6 56 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 LIN7CQ9NUP9 197 aaKnown RBP9.43□□□□□ -0.9
HMGN1-213ENST00000482192 RAB22AQ9UL26 194 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 MGAT4AQ9UM21 535 aa9.43□□□□□ -0.9
HMGN1-213ENST00000482192 TMEM272A0A1B0GTI8 110 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 SHISA3A0PJX4 238 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 PSMB11A5LHX3 300 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 SERPINE3A8MV23 424 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-213ENST00000482192 WIPF1O43516 503 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 RAB3BP20337 219 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 FGF9P31371 208 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-213ENST00000482192 LSAMPQ13449 338 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 ZNF773Q6PK81 442 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 SLC35E3Q7Z769 313 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 ODF3L1Q8IXM7 274 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 R3HDM4Q96D70 268 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 HDHD3Q9BSH5 251 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-213ENST00000482192 PECRQ9BY49 303 aa9.42□□□□□ -0.9
HMGN1-213ENST00000482192 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
HMGN1-213ENST00000482192 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 TCRBV4S1A1TA0A5B7 111 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 KCNAB3O43448 404 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 IGHG2P01859 326 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-213ENST00000482192 RAB6AP20340 208 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 ZBTB25P24278 435 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 GADD45AP24522 165 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 TMEM50BP56557 158 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 MRPS15P82914 257 aaKnown RBP9.41□□□□□ -0.9
HMGN1-213ENST00000482192 PLAC9Q5JTB6 97 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 FAM71F2Q6NXP2 309 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 ZNF833PQ6ZTB9 187 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 Q8N9W7 124 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 RAB3CQ96E17 227 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 S1PR3Q99500 378 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 CMSS1Q9BQ75 279 aaKnown RBP9.41□□□□□ -0.9
HMGN1-213ENST00000482192 ABCG5Q9H222 651 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 IFI27L2Q9H2X8 130 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 GHITMQ9H3K2 345 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 Q9N2K0 584 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 TXNL4BQ9NX01 149 aaKnown RBP9.41□□□□□ -0.9
HMGN1-213ENST00000482192 PIPOXQ9P0Z9 390 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 SLC23A1Q9UHI7 598 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 STUB1Q9UNE7 303 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-213ENST00000482192 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
HMGN1-213ENST00000482192 RAB29O14966 203 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 ST8SIA5O15466 376 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 PF4V1P10720 104 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 GPR12P47775 334 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 OR3A3P47888 321 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 SLC35B1P78383 322 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 PLA2G7Q13093 441 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 KCTD21Q4G0X4 260 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 OR10R2Q8NGX6 335 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 PTX4Q96A99 478 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 NABP2Q9BQ15 211 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 GON7Q9BXV9 100 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.9
HMGN1-213ENST00000482192 PLSCR3Q9NRY6 295 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 SSR3Q9UNL2 185 aa9.4□□□□□ -0.9
HMGN1-213ENST00000482192 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 METTL21EPA6NDL7 271 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 TRDCB7Z8K6 153 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 AP4M1O00189 453 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 ITGB1BP1O14713 200 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 HSPA12AO43301 675 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 SCTP09683 121 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 CD3GP09693 182 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 SOX6P35712 828 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 CEACAM6P40199 344 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 MMDQ15546 238 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 MOGAT2Q3SYC2 334 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 ZNF329Q86UD4 541 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 TPRA1Q86W33 373 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 NR2C2APQ86WQ0 139 aa9.39□□□□□ -0.91
HMGN1-213ENST00000482192 C1QL4Q86Z23 238 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms