RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZFHX2Q9C0A1 2572 aaPredicted RBP0.94□□□□□ -2.26
SMC4-207ENST00000467263 CCDC88CQ9P219 2028 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 IGHV3-15A0A0B4J1V0 119 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 RAB19A4D1S5 217 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 GNRH2O43555 120 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 CCNOP22674 350 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 TSPEAR-AS2P59090 65 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 XIAPP98170 497 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 CDRT4Q8N9R6 151 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 ACBD4Q8NC06 268 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 CIDECQ96AQ7 238 aaPredicted RBP0.93□□□□□ -2.26
SMC4-207ENST00000467263 MED18Q9BUE0 208 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 GTSF1LQ9H1H1 148 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 C11orf1Q9H5F2 150 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 METTL17Q9H7H0 456 aaPredicted RBP0.93□□□□□ -2.26
SMC4-207ENST00000467263 METTL8Q9H825 291 aaKnown RBP0.93□□□□□ -2.26
SMC4-207ENST00000467263 SCN9AQ15858 1988 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 RAB3GAP2Q9H2M9 1393 aa0.93□□□□□ -2.26
SMC4-207ENST00000467263 H3BSA7 217 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 UBFD1O14562 309 aaKnown RBP0.92□□□□□ -2.26
SMC4-207ENST00000467263 ATF1P18846 271 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 ORM2P19652 201 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 RAP1GDS1P52306 607 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 BSXQ3C1V8 233 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 TRMT12Q53H54 448 aaKnown RBP0.92□□□□□ -2.26
SMC4-207ENST00000467263 CENPWQ5EE01 88 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 Q6ZTI0 123 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 OR2Y1Q8NGV0 311 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 SNX12Q9UMY4 172 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 SNX24Q9Y343 169 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 MRPS16Q9Y3D3 137 aaKnown RBP0.92□□□□□ -2.26
SMC4-207ENST00000467263 PUS1Q9Y606 427 aaKnown RBP eCLIP0.92□□□□□ -2.26
SMC4-207ENST00000467263 KDM5BQ9UGL1 1544 aa0.92□□□□□ -2.26
SMC4-207ENST00000467263 KIAA2026Q5HYC2 2103 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 RTTNQ86VV8 2226 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 A8MUN3 132 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 GADD45AP24522 165 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 RCVRNP35243 200 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 RPL14P50914 215 aaKnown RBP0.91□□□□□ -2.26
SMC4-207ENST00000467263 ACTBP60709 375 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 ACTG1P63261 375 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 C18orf21Q32NC0 220 aaPredicted RBP0.91□□□□□ -2.26
SMC4-207ENST00000467263 OR10J3Q5JRS4 329 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 C10orf105Q8TEF2 133 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 RETNLBQ9BQ08 111 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 RAB1BQ9H0U4 201 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 NUMA1Q14980 2115 aa0.91□□□□□ -2.26
SMC4-207ENST00000467263 EFCAB9A8MZ26 197 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 CRXO43186 299 aaPredicted RBP0.9□□□□□ -2.27
SMC4-207ENST00000467263 CRHBPP24387 322 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 OR10A3P58181 314 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 ERHP84090 104 aaKnown RBP0.9□□□□□ -2.27
SMC4-207ENST00000467263 FAM201AQ5SY85 155 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 TMEM75Q8N9X5 138 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 GOLPH3Q9H4A6 298 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 DNAJC12Q9UKB3 198 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 TENM3Q9P273 2699 aa0.9□□□□□ -2.27
SMC4-207ENST00000467263 TNIKQ9UKE5 1360 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 MDFIC2A0A1B0GVS7 189 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 LINC00862A6NCI5 91 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 TMEM235A6NFC5 223 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 RFPL4AA6NLU0 287 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 C2orf74A8MZ97 194 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 RFPL4AL1F8VTS6 287 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 GPR171O14626 319 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 CYTH3O43739 400 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 SNAP29O95721 258 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 SERPINB10P48595 397 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 PSMB3P49720 205 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 CARD18P57730 90 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 TNNC1P63316 161 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 ZNF90Q03938 601 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.89□□□□□ -2.27
SMC4-207ENST00000467263 MRPL52Q86TS9 123 aaKnown RBP0.89□□□□□ -2.27
SMC4-207ENST00000467263 LRRC28Q86X40 367 aaPredicted RBP0.89□□□□□ -2.27
SMC4-207ENST00000467263 OR4P4Q8NGL7 312 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 TRNT1Q96Q11 434 aaKnown RBP0.89□□□□□ -2.27
SMC4-207ENST00000467263 MAT2BQ9NZL9 334 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 TMEM216Q9P0N5 145 aa0.89□□□□□ -2.27
SMC4-207ENST00000467263 DSCAMO60469 2012 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 GRIFINA4D1Z8 144 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 ZW10O43264 779 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 ZNF705DP0CH99 300 aaPredicted RBP0.88□□□□□ -2.27
SMC4-207ENST00000467263 ZNF705BP0CI00 300 aaPredicted RBP0.88□□□□□ -2.27
SMC4-207ENST00000467263 SLC38A11Q08AI6 406 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 MTERF4Q7Z6M4 381 aaKnown RBP0.88□□□□□ -2.27
SMC4-207ENST00000467263 LRRC6Q86X45 466 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 OR5K1Q8NHB7 308 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 LHFPL5Q8TAF8 219 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 FNDC9Q8TBE3 224 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 LRRC20Q8TCA0 184 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 CHST5Q9GZS9 411 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 BABAM2Q9NXR7 383 aa0.88□□□□□ -2.27
SMC4-207ENST00000467263 TMSB15BA0A087X1C1 80 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 A0A1B0GX12 115 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 H0YC42 278 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 LDOC1O95751 146 aaPredicted RBP0.87□□□□□ -2.27
SMC4-207ENST00000467263 CCL3P10147 92 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 CDK2P24941 298 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 CRYBB3P26998 211 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms