RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 HcstQ9QUJ0 79 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Adh4Q9QYY9 377 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Il18bpQ9Z0M9 193 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 CadB2RQC6 2225 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 PtprdQ64487 1912 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Fndc10A2A9Q0 223 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 TcapO70548 167 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 SftpcP21841 193 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Hnf1aP22361 628 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Aph1aQ8BVF7 265 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Defb21Q8C5Z4 100 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Pla2g16Q8R3U1 162 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cotl1Q9CQI6 142 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Mrpl18Q9CQL5 180 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Neu3Q9JMH7 418 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ccr9Q9WUT7 369 aa9.61□□□□□ -0.87
Msh3-201ENSMUST00000022220 Frem1Q684R7 2191 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Trav8n-2A0A075B633 112 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1223A0A1L1SU13 311 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr557E9Q550 322 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 H2-LP01897 362 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 CtsaP16675 474 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Dnase1P49183 284 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gsc2P56916 198 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 CycsP62897 105 aaKnown RBP9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Defb4P82019 63 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rsu1Q01730 277 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cd84Q18PI6 329 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gnb3Q61011 340 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Sox19Q62249 55 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 GcsamQ6RFH4 181 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Lpar6Q8BMC0 344 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1257Q8VGP0 309 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gpx4Q91XR9 253 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Stard4Q99JV5 224 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cd46O88174 365 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ifna9P09235 190 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 HexbP20060 536 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gabrg3P27681 467 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rpl12P35979 165 aaKnown RBP9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Kcng3P59053 433 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Dynlrb1P62627 96 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 SgcaP82350 387 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 PkibQ04758 92 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Wfdc6aQ3UW55 136 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 TpppQ7TQD2 218 aaKnown RBP9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Wasf3Q8VHI6 501 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cacng5Q8VHW4 275 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Q8WUR0 141 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 MrnipQ9D1F5 335 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Spaca7Q9D2S4 182 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ndufa9Q9DC69 377 aaKnown RBP9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Syt7Q9R0N7 403 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Spint2Q9WU03 252 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Chd8Q09XV5 2582 aaKnown RBP9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Trav12n-2A0A075B626 113 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vmn1r82A0A087WRV1 305 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rabl2E9Q9D5 223 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Igk-V19-17P01633 149 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Slc34a1Q60825 637 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ceacam14Q78Y72 263 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ell3Q80VR2 395 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 B3gnt8Q8R3I9 389 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1449Q8VEV8 314 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1393Q8VFA7 311 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Tas2r4Q9JKT3 297 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 SrfQ9JM73 504 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Klrc3Q9QXN7 221 aa9.6□□□□□ -0.87
Msh3-201ENSMUST00000022220 Prpf8Q99PV0 2335 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm10358A0A1D5RLD8 333 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 GapdhP16858 333 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Fam160a2Q3U2I3 975 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Taar8bQ5QD06 344 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Flrt1Q6RKD8 674 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1229Q7TQZ9 311 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 ClmQ7TSN2 230 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rab9bQ8BHH2 201 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rps19bp1Q8C6B9 143 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr830Q8VFJ5 315 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr969Q8VG89 311 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rpl7l1Q9D8M4 246 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 PrndQ9QUG3 179 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Psmb3Q9R1P1 205 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm3839S4R1W1 333 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm14409A2ARR8 349 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Lyz2P08905 148 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Il9P15247 144 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Pafah1b3Q61205 232 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Fbll1Q80WS3 314 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Mr1Q8HWB0 341 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rfpl4aQ8VH31 287 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 FcrlsQ9EQY5 509 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Plxnb1Q8CJH3 2119 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr685A0A1L1SVG7 331 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Zfp688E9Q5M9 274 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 P2rx6O54803 389 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vamp2P63044 116 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 MpgQ04841 333 aaKnown RBP9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Sft2d1Q5SSN7 159 aa9.59□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr132Q7TRI8 313 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms