RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 FBLN5Q9UBX5 448 aa13.14□□□□□ -0.31
ERBB2-222ENST00000584908 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
ERBB2-222ENST00000584908 V9GY05 133 aa13.14□□□□□ -0.31
ERBB2-222ENST00000584908 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
ERBB2-222ENST00000584908 ORC5O43913 435 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 PSMB9P28065 219 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 CHATP28329 748 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 SYT6Q5T7P8 510 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-222ENST00000584908 OR10K2Q6IF99 312 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 AIPO00170 330 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 CRYBA1P05813 215 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 ARSBP15848 533 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 PAX6P26367 422 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 HTR1DP28221 377 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 SSTR5P35346 364 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 RAB11BQ15907 218 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 SSX2Q16385 188 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 OR52M1Q8NGK5 317 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 OR4F5Q8NH21 305 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 DPM3Q9P2X0 92 aa13.13□□□□□ -0.31
ERBB2-222ENST00000584908 TRAV39A0A0B4J263 110 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 LY6LH3BQJ8 138 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 PDCD5O14737 125 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 LDLRAD4O15165 306 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 PRRX1P54821 245 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 RAG2P55895 527 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 UTF1Q5T230 341 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 OR9G1Q8NH87 305 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 TAF15Q92804 592 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERBB2-222ENST00000584908 ZNF747Q9BV97 191 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 LPAR5Q9H1C0 372 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 KCNK15Q9H427 330 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
ERBB2-222ENST00000584908 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
ERBB2-222ENST00000584908 FBN3Q75N90 2809 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 A0A0A6YYD4 124 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 FOXI3A8MTJ6 420 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-222ENST00000584908 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 J3QR06 171 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 F2RL2O00254 374 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 TSPAN9O75954 239 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 MDKP21741 143 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-222ENST00000584908 MYL9P24844 172 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 NFYBP25208 207 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 P2RY14Q15391 338 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 Q3ZCU0 254 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-222ENST00000584908 C22orf42Q6IC83 251 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 C3orf56Q8N813 242 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 OR51D1Q8NGF3 324 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 RFESDQ8TAC1 157 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 NDNFQ8TB73 568 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 FAM3DQ96BQ1 224 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 NEDD4LQ96PU5 975 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 NICN1Q9BSH3 213 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
ERBB2-222ENST00000584908 MMP28Q9H239 520 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 BEX1Q9HBH7 125 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
ERBB2-222ENST00000584908 STEAP1Q9UHE8 339 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 PSG11Q9UQ72 335 aa13.11□□□□□ -0.31
ERBB2-222ENST00000584908 PKD1L1Q8TDX9 2849 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 UBE2QL1A1L167 161 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 IFITM5A6NNB3 132 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 LEUTXA8MZ59 168 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 OOSP1A8MZH6 123 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 TOR1AO14656 332 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 RAB3BP20337 219 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 CEACAM3P40198 252 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 LOXL3P58215 753 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 FAM189A2Q15884 450 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 Q6ZSV7 163 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 C8orf31Q8N9H6 132 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
ERBB2-222ENST00000584908 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 ARL11Q969Q4 196 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 SULT4A1Q9BR01 284 aa13.1□□□□□ -0.31
ERBB2-222ENST00000584908 RAB9BQ9NP90 201 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms