RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 C10orf91Q5T1B1 145 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 NIPAL1Q6NVV3 410 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 NOXRED1Q6NXP6 359 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 SSX7Q7RTT5 188 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 TCF23Q7RTU1 214 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 SPPL2BQ8TCT7 592 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 LMX1AQ8TE12 382 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 ZCCHC13Q8WW36 166 aaKnown RBP1.98□□□□□ -2.09
CHD9-215ENST00000565442 RAD51AP1Q96B01 352 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 DDIT4LQ96D03 193 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 OR8B2Q96RD0 313 aa1.98□□□□□ -2.09
CHD9-215ENST00000565442 ALX4Q9H161 411 aaPredicted RBP1.98□□□□□ -2.09
CHD9-215ENST00000565442 METTL17Q9H7H0 456 aaPredicted RBP1.98□□□□□ -2.09
CHD9-215ENST00000565442 RPUSD1Q9UJJ7 312 aaKnown RBP1.98□□□□□ -2.09
CHD9-215ENST00000565442 YLPM1P49750 1951 aaKnown RBP1.98□□□□□ -2.09
CHD9-215ENST00000565442 MYO15BQ96JP2 1530 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 ZNF878C9JN71 531 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 LECT2O14960 151 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 EPPINO95925 133 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 GP1BAP07359 652 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 PSKH1P11801 424 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 UGT2B10P36537 528 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 APOFQ13790 326 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 CST6Q15828 149 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 SCXQ7RTU7 201 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 OR10D4PQ8NGN7 298 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 HIST1H2BAQ96A08 127 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 MRPL16Q9NX20 251 aaKnown RBP1.97□□□□□ -2.09
CHD9-215ENST00000565442 LINC00588Q9Y4M8 146 aa1.97□□□□□ -2.09
CHD9-215ENST00000565442 ARAP3Q8WWN8 1544 aa1.96□□□□□ -2.09
CHD9-215ENST00000565442 WIZO95785 1651 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 EFCAB9A8MZ26 197 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 GPR171O14626 319 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 LIMS3P0CW19 117 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 LIMS4P0CW20 117 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 ATF1P18846 271 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 ACTR1BP42025 376 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 ANGPT1Q15389 498 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 USF2Q15853 346 aaPredicted RBP1.96□□□□□ -2.1
CHD9-215ENST00000565442 PYCR3Q53H96 274 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 NIT1Q86X76 327 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 SELENOHQ8IZQ5 122 aaKnown RBP1.96□□□□□ -2.1
CHD9-215ENST00000565442 SYCE1Q8N0S2 351 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 MUC15Q8N387 334 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 DTD1Q8TEA8 209 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 RORBQ92753 470 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 GTF2H4Q92759 462 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 BCL2L14Q9BZR8 327 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 DMAC2Q9NW81 257 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 RB1CC1Q8TDY2 1594 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 RAB3GAP2Q9H2M9 1393 aa1.96□□□□□ -2.1
CHD9-215ENST00000565442 IGKV1-12A0A0C4DH73 117 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 ZNF73O43830 326 aaPredicted RBP1.95□□□□□ -2.1
CHD9-215ENST00000565442 CDK14O94921 469 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 LTAP01374 205 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 IGKV1D-12P01611 117 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 CRABP1P29762 137 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 RCVRNP35243 200 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 INPP1P49441 399 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 TSPAN31Q12999 210 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 SKP2Q13309 424 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 XRCC4Q13426 336 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 SYCP1Q15431 976 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 TMEM249Q2WGJ8 235 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 HES3Q5TGS1 186 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 OR5D18Q8NGL1 313 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 OR9I1Q8NGQ6 314 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 OR11L1Q8NGX0 322 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 MFSD8Q8NHS3 518 aa1.95□□□□□ -2.1
CHD9-215ENST00000565442 RNASEH2CQ8TDP1 164 aaKnown RBP1.95□□□□□ -2.1
CHD9-215ENST00000565442 ERICH4A6NGS2 130 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 KLRC4-KLRK1H3BQV0 150 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 K7EQS6 105 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 SLC25A20O43772 301 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 SOX14O95416 240 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 CBR1P16152 277 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 GABRA3P34903 492 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 COILP38432 576 aaPredicted RBP1.94□□□□□ -2.1
CHD9-215ENST00000565442 SPAM1P38567 509 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 PSMD7P51665 324 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 C1QTNF8P60827 252 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 DEFA6Q01524 100 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 C17orf78Q8N4C9 275 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 ZNRF2Q8NHG8 242 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 TMEM56Q96MV1 263 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 FAM210AQ96ND0 272 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 ZNF286AQ9HBT8 521 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 COMMD9Q9P000 198 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 FBXL3Q9UKT7 428 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 BRD4O60885 1362 aaPredicted RBP1.94□□□□□ -2.1
CHD9-215ENST00000565442 KIAA0232Q92628 1395 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 CECR2Q9BXF3 1484 aa1.94□□□□□ -2.1
CHD9-215ENST00000565442 DCAF1Q9Y4B6 1507 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 DNMT1P26358 1616 aaKnown RBP1.93□□□□□ -2.1
CHD9-215ENST00000565442 IGHV3OR15-7A0A075B7D8 119 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 B4DEV8 164 aa1.93□□□□□ -2.1
CHD9-215ENST00000565442 HSBP1L1C9JCN9 74 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms