RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 ZNF616Q08AN1 781 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 ZNF816Q0VGE8 651 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-210ENST00000505589 FHL3Q13643 280 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 C17orf58Q2M2W7 97 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 AADACL4Q5VUY2 407 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 NXNL2Q5VZ03 156 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 PLEKHG7Q6ZR37 379 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 MOB3BQ86TA1 216 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 CATSPERDQ86XM0 798 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 GID4Q8IVV7 300 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 SLC35F2Q8IXU6 374 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 BBS1Q8NFJ9 593 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 OR1N2Q8NGR9 330 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 RFKQ969G6 155 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 CPNE2Q96FN4 548 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-210ENST00000505589 KIRREL1Q96J84 757 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 MYCBPQ99417 103 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-210ENST00000505589 LINC00574Q9H8X3 128 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 RAB9BQ9NP90 201 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 FKBP14Q9NWM8 211 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 CNOT2Q9NZN8 540 aaKnown RBP7.76□□□□□ -1.17
NEDD9-210ENST00000505589 PSG11Q9UQ72 335 aa7.76□□□□□ -1.17
NEDD9-210ENST00000505589 LYSTQ99698 3801 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 FAM172BPA6NC97 362 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 EFCAB10A6NFE3 127 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 METTL15A6NJ78 407 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 SNTNA6NMZ2 147 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 RGS10O43665 173 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 KDM4BO94953 1096 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 RPP14O95059 124 aaKnown RBP7.75□□□□□ -1.17
NEDD9-210ENST00000505589 IGF1P05019 195 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 ZNF20P17024 532 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 ATF1P18846 271 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 SOX6P35712 828 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 RUNX1Q01196 453 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 ODF4Q2M2E3 257 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 AHSA2Q719I0 299 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 KCTD20Q7Z5Y7 419 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 OR51T1Q8NGJ9 327 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 EAF1Q96JC9 268 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-210ENST00000505589 OR51J1Q9H342 316 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 BATF3Q9NR55 127 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 MRM2Q9UI43 246 aaKnown RBP7.75□□□□□ -1.17
NEDD9-210ENST00000505589 VSIG4Q9Y279 399 aa7.75□□□□□ -1.17
NEDD9-210ENST00000505589 RPL36Q9Y3U8 105 aaKnown RBP7.75□□□□□ -1.17
NEDD9-210ENST00000505589 MEIKINA0A087WXM9 373 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 IGHV1-3A0A0C4DH29 117 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 A0A1W2PPI3 338 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 IRGMA1A4Y4 181 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 NPIPB11E5RHQ5 1161 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 PTGES3LE9PB15 166 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 OVOL1O14753 267 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 SAP30O75446 220 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 MOSP00540 346 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 IL1AP01583 271 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 CDK1P06493 297 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 FRMD6-AS1P0C7T7 363 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 CGB3P0DN86 165 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 CGB7P0DN87 165 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 GP9P14770 177 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 PSMB8P28062 276 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 HTR1FP30939 366 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 ATP6V1E1P36543 226 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 MTNR1BP49286 362 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 SNU13P55769 128 aaKnown RBP7.74□□□□□ -1.17
NEDD9-210ENST00000505589 ZP1P60852 638 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 GALEQ14376 348 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 DEFB136Q30KP8 78 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 Q3ZCU0 254 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 KIAA2026Q5HYC2 2103 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 BAIAP2L2Q6UXY1 529 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 PRSS48Q7RTY5 328 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 FAM220AQ7Z4H9 259 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 BCDIN3DQ7Z5W3 292 aaKnown RBP7.74□□□□□ -1.17
NEDD9-210ENST00000505589 IZUMO1Q8IYV9 350 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 SPARTQ8N0X7 666 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 FAM71E2Q8N5Q1 922 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 OR52M1Q8NGK5 317 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 GGHQ92820 318 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 OPALINQ96PE5 141 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 S1PR3Q99500 378 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 VCX3AQ9NNX9 186 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 AMBNQ9NP70 447 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 CALYQ9NYX4 217 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 WARS2Q9UGM6 360 aaKnown RBP7.74□□□□□ -1.17
NEDD9-210ENST00000505589 TENM2Q9NT68 2774 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 SORL1Q92673 2214 aa7.74□□□□□ -1.17
NEDD9-210ENST00000505589 CCDC182A6NF36 153 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 A8MZ25 164 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 SLC33A1O00400 549 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-210ENST00000505589 HSD17B6O14756 317 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 MT-ND2P03891 347 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 ISG15P05161 165 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 TFAP2AP05549 437 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 GDNFP39905 211 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 RPL5P46777 297 aaKnown RBP7.73□□□□□ -1.17
NEDD9-210ENST00000505589 PAX5Q02548 391 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 ST3GAL4Q11206 333 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 RAB40BQ12829 278 aa7.73□□□□□ -1.17
NEDD9-210ENST00000505589 TMED1Q13445 227 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms