RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 RangrfQ9JIB0 185 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr288E9Q1P2 318 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Lrp3E9Q1T6 790 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r7E9Q8T0 311 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rpusd3Q14AI6 344 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Mob3cQ8BJG4 216 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr46Q8VGJ4 318 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 HraslsQ9QZU4 167 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Cldn34c3J3QJW5 233 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rps16P14131 146 aaKnown RBP14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr324Q5NCC7 333 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1453Q8VFX0 307 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Qrsl1Q9CZN8 525 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 A0A286YDM5 308 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Arxes1C0HK79 180 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Arxes2C0HK80 180 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Syngr2O55101 224 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wdr1O88342 606 aaKnown RBP14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gsx2P31316 305 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Reg2Q08731 173 aa14.98□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 2410141K09RikK7N769 464 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Cldn1O88551 211 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rpl29P47915 160 aaKnown RBP14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 RhobP62746 196 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 SrstQ06666 185 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Defb43Q30KM9 69 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Acsf3Q3URE1 583 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Psmb2Q9R1P3 201 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm4175D3YTW8 314 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r34G3XA52 309 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r114L7N226 321 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r126L7N2C8 321 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 StumQ0VBF8 141 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Tmem106cQ80VP8 260 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Nudt16l1Q8VHN8 211 aaKnown RBP14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Man2c1Q91W89 1039 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 SnrpnP63163 240 aaKnown RBP14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Pitx2P97474 317 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm10840Q3V2K9 103 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r183Q8K3N5 305 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ms4a6dQ99N07 247 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Q9DAE7 121 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Try5Q9QUK9 246 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Try4Q9R0T7 246 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Scgb1b12A0A087WP21 93 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr547E9PXN3 311 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Oprk1P33534 380 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 KhsrpQ3U0V1 748 aaKnown RBP14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Taar5Q5QD14 337 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Lrit3W8DXL4 681 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Adap1E9PY16 374 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 AanatO88816 205 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 P01807 119 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 NdnP25233 325 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fam187bQ0VAY3 358 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 St8sia1Q64687 355 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1437Q7TQR7 312 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Med19Q8C1S0 244 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Slc50a1Q9CXK4 221 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dtwd2Q9D0U1 298 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Dolpp1Q9JMF7 238 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr204E9Q8M0 305 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 HcrtO55241 130 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Klk1b5P15945 261 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Sult1a1P52840 291 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Wbp2P97765 261 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Osr2Q91ZD1 312 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Ros1Q78DX7 2340 aa14.97□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm20503G3UZK1 150 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fbxw20Q5U467 468 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r56Q9EPS9 310 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr715Q8VG49 315 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Gm4779A0A1B0GR91 561 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr869E9PX82 323 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 PigzQ8BTP0 560 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fam234aQ8C0Z1 555 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Asah1Q9WV54 394 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Irs1P35569 1233 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Muc20Q8BUE7 656 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Olfr1293-psA0A1L1SVB5 326 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 9130019O22RikG3X941 543 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Fam189bQ5HZJ5 669 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Lhfpl2Q8BGA2 222 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Rnps1Q99M28 305 aaKnown RBP14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r63Q9EPT1 300 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Irak1bp1Q9ESJ7 259 aa14.96□□□□□ -0.01
Ccdc88a-201ENSMUST00000040182 Col18a1P39061 1774 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 ZxdbA2CE44 873 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Atp6v1fQ9D1K2 119 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 SdcbpO08992 299 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ier3P46694 153 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Fstl4Q5STE3 841 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gpatch2Q7TQC7 527 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr50Q8VGK5 312 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Tex33Q9D9J2 266 aa14.96□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Dock1Q8BUR4 1865 aa14.95□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Q3U595 105 aa14.95□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Thoc3Q8VE80 351 aa14.95□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr803Q8VFI3 308 aa14.95□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr1240Q8VG73 314 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms