RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 WARS2Q9UGM6 360 aaKnown RBP3.87□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF391Q9UJN7 358 aa3.87□□□□□ -1.79
SDCBP-207ENST00000520168 COA3Q9Y2R0 106 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-207ENST00000520168 STRAPQ9Y3F4 350 aaKnown RBP3.87□□□□□ -1.79
SDCBP-207ENST00000520168 LHFPL6Q9Y693 200 aa3.87□□□□□ -1.79
SDCBP-207ENST00000520168 MINOS1-NBL1R4GNA1 71 aa3.87□□□□□ -1.79
SDCBP-207ENST00000520168 TRAV27A0A087WT01 109 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ANXA2P2A6NMY6 339 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 OR2AT4A6NND4 320 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ZAR1LA6NP61 321 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CCL24O00175 119 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CDIPTO14735 213 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 TSPAN4O14817 238 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RGS10O43665 173 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SCGB2A1O75556 95 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 OR2F2O95006 317 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 LY86O95711 162 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GASTP01350 101 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 IFNA6P05013 189 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 LPLP06858 475 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 FABP1P07148 127 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 IGHV1-8P0DP01 117 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 IFI30P13284 250 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 OSMP13725 252 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 COX7A1P24310 79 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 PAX6P26367 422 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CD40LGP29965 261 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 YAP1P46937 504 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CRISP1P54107 249 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RAB25P57735 213 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SPCS3P61009 180 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF92Q03936 586 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ST3GAL3Q11203 375 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 KRR1Q13601 381 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GPR176Q14439 515 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SMCO1Q147U7 214 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RSPO1Q2MKA7 263 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 MOGAT2Q3SYC2 334 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ABCA11PQ4W5N1 156 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SLC25A30Q5SVS4 291 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SYT6Q5T7P8 510 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 XAF1Q6GPH4 301 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 PLEKHG7Q6ZR37 379 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 LINC00299Q6ZSB3 139 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 LHFPL4Q7Z7J7 247 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF429Q86V71 674 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF573Q86YE8 665 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RBM45Q8IUH3 476 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ENTHD1Q8IYW4 607 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ELMOD2Q8IZ81 293 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RNF113BQ8IZP6 322 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 DYNAPQ8N1N2 210 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF561Q8N587 486 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SYT8Q8NBV8 401 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 UXS1Q8NBZ7 420 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CSNK2A3Q8NEV1 391 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM185AQ8NFB2 350 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GPR32P1Q8NGA4 272 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 OR4D11Q8NGI4 311 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 OR4Q3Q8NH05 313 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RNASE11Q8TAA1 199 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GNPDA2Q8TDQ7 276 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GATAD1Q8WUU5 269 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GLMPQ8WWB7 406 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RNFT2Q96EX2 444 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SDSLQ96GA7 329 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 MICU1Q9BPX6 476 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SPATA25Q9BR10 227 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 FUZQ9BT04 418 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 FNDC11Q9BVV2 318 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 RTL8AQ9BWD3 113 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 GON7Q9BXV9 100 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CCDC90BQ9GZT6 254 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 SYT4Q9H2B2 425 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM140Q9NV12 185 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 ERVK13-1Q9NX77 482 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CNOT2Q9NZN8 540 aaKnown RBP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 NLKQ9UBE8 527 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 MGAT4CQ9UBM8 478 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 CYB5R1Q9UHQ9 305 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 PSORS1C1Q9UIG5 152 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 KCNG2Q9UJ96 466 aa3.86□□□□□ -1.79
SDCBP-207ENST00000520168 PUS1Q9Y606 427 aaKnown RBP eCLIP3.86□□□□□ -1.79
SDCBP-207ENST00000520168 C17orf98A8MV24 154 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 A8MZ25 164 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 EFCAB9A8MZ26 197 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 H3BMQ9 156 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 J3KTA2 159 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 CCRL2O00421 344 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 FFAR1O14842 300 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 SLC22A1O15245 554 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 APOC1P02654 83 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 HTR1AP08908 422 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 PIPP12273 146 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GABRB1P18505 474 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 TNFRSF1BP20333 461 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GLRA1P23415 457 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 EPHA2P29317 976 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms