RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 UBBP0CG47 229 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 GTF2F2P13984 249 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 GABRR1P24046 479 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 GABRA2P47869 451 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 KRTAP10-3P60369 221 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 SCN1BQ07699 218 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 MOGAT2Q3SYC2 334 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 STUMQ69YW2 141 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 OR2W3Q7Z3T1 314 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 CROCCP3Q8IVE0 287 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 Q8IYB0 196 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 Q8NFD4 153 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 Q96M66 194 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 TMEM59Q9BXS4 323 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 CST11Q9H112 138 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 LPAR5Q9H1C0 372 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 RASL12Q9NYN1 266 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 ONECUT1Q9UBC0 465 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNF222Q9UK12 451 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 ST3GAL6Q9Y274 331 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 SIRPB1O00241 398 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 HSPB6O14558 160 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 TSPAN9O75954 239 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 HAND1O96004 215 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 SOX6P35712 828 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 CAPZA1P52907 286 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 RPS27AP62979 156 aaKnown RBP11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 IKZF1Q13422 519 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 GPR176Q14439 515 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 DHRS7BQ6IAN0 325 aaPredicted RBP11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 Q6P435 159 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 Q6ZSV7 163 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 PDZD9Q8IXQ8 264 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 SAMD12Q8N8I0 201 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 OR51T1Q8NGJ9 327 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 MCFD2Q8NI22 146 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 ANGPTL6Q8NI99 470 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 KCNG3Q8TAE7 436 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 C8orf46Q8TAG6 207 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 MED30Q96HR3 178 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 FBLN5Q9UBX5 448 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
PDLIM2-213ENST00000448520 TMEM82A0PJX8 343 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 SOCS1O15524 211 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 OR2H2O95918 312 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 PRDX2P32119 198 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 VEGFCP49767 419 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 BMXP51813 675 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 COL10A1Q03692 680 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 IZUMO1Q8IYV9 350 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 KCTD12Q96CX2 325 aaKnown RBP11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 TM2D1Q9BX74 207 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 ATG5Q9H1Y0 275 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNRD1Q9P1U0 126 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 RAB22AQ9UL26 194 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 MAB21L2Q9Y586 359 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
PDLIM2-213ENST00000448520 TRAV24A0A0B4J272 114 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 M0R1W7 72 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 DEGS1O15121 323 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 NPFFO15130 113 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNF44P15621 663 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ELK1P19419 428 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 RAB6AP20340 208 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 UBE2E1P51965 193 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 IL13RA2Q14627 380 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNF146Q15072 292 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 NKAPLQ5M9Q1 402 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ATAD3CQ5T2N8 411 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 NCR3LG1Q68D85 454 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNF788Q6ZQV5 615 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 LAX1Q8IWV1 398 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 AP3S1Q92572 193 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 CHST6Q9GZX3 395 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 PPA2Q9H2U2 334 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 SIRT7Q9NRC8 400 aa11.21□□□□□ -0.61
PDLIM2-213ENST00000448520 A0A075B6Q4 140 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 NKX6-3A6NJ46 265 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 FOXI3A8MTJ6 420 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 RNASEK-C17orf49H0YIS7 233 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 RAB27BO00194 218 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms