RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Fgf21Q9JJN1 210 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Tcrg-V3A0A0G2JEW2 117 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Zfp873A0A1B0GT64 667 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 5430401F13RikE9Q328 175 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Gm21834J3QN05 151 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 RaxO35602 342 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 P04214 136 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Chrna7P49582 502 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Cib3Q0P523 160 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Npy6rQ61212 371 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Polr2hQ923G2 150 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ms4a4dQ99N05 225 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Arr3Q9EQP6 381 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ank3G5E8K5 1961 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Prrt2E9PUL5 346 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr424E9Q0Q2 315 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr31E9Q3K2 317 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ankrd65F6YK91 380 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Lmx1bO88609 395 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 P01809 118 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 H3f3cP02301 136 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Csn1s2bP02664 143 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 H3f3aP84244 136 aaKnown RBP10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 NrtnP97463 195 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Hes3Q61657 175 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Wdyhv1Q80WB5 209 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Nanos1Q80WY3 267 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Lsm11Q8BUV6 361 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Slc35a3Q8R1T4 326 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr1339Q8VGB1 315 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Lrg1Q91XL1 342 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ear6Q923L7 155 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Nmnat3Q99JR6 245 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Mrpl49Q9CQ40 166 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Shisal2bQ9D1Y9 158 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 OxsmQ9D404 459 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Q9DAF8 208 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Hsd17b6Q9R092 317 aa10.98□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Scn5aQ9JJV9 2019 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 P01657 111 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 NcanP55066 1268 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Znf48Q3US17 591 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Adora3Q61618 319 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 AstlQ6HA09 435 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Onecut2Q6XBJ3 505 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Kiss1Q6Y4S4 130 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr1113Q7TR54 326 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Q80X32 188 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Sdhaf3Q8BQU3 125 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ccdc187Q8C5V8 958 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Med25Q8VCB2 745 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Clec2dQ91V08 207 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr588-ps1A0A1B0GSZ2 313 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Vmn2r76E9Q3F5 853 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr554E9Q546 317 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Gm17654F7AXR3 209 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 EllO08856 602 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 B2mP01887 119 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Pebp1P70296 187 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Plppr1Q8BFZ2 325 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Crispld2Q8BZQ2 495 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Las2Q8CB14 526 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Fbxw17Q8CFE8 466 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Lime1Q9EQR5 269 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Fbxo15Q9QZN0 433 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 PoleQ9WVF7 2283 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr1018A2ASV3 311 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Vmn2r28L7N203 852 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Hmgb3O54879 200 aaKnown RBP10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Siah2Q06986 325 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Znf488Q5HZG9 337 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Gpr135Q7TQP2 457 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Upp2Q8CGR7 320 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Arfgap3Q9D8S3 523 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Vmn1r41Q9EQ44 310 aa10.97□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Hoxb3P09026 433 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Lgals3P16110 264 aaKnown RBP10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Slc6a9P28571 692 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Fbxo7Q3U7U3 523 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Slc22a14Q497L9 629 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Nol4lQ6DIB4 494 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 TifaQ793I8 184 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr180Q7TS48 317 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Vash1Q8C1W1 375 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Q8CF25 301 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Vmn1r36Q8R2E3 305 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Arrdc1Q99KN1 434 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Elovl7Q9D2Y9 281 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ca13Q9D6N1 262 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Zfp27P10077 819 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 LcatP16301 438 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Ca6P18761 317 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Il13P20109 131 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Rnd3P61588 244 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Akt2Q60823 481 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 SlaQ60898 281 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Olfr1162Q7TR28 314 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Zfand1Q8BFR6 268 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 PhyhiplQ8BGT8 375 aa10.96□□□□□ -0.65
Pcdh1-202ENSMUST00000159405 Faap24Q8BHL6 221 aa10.96□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms