Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm25239-201ENSMUST00000174915 86 ntBASIC42.66■■■■■ 4.42
P04214 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
P04214 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
P04214 Gm24109-201ENSMUST00000175489 103 ntBASIC37.13■■■■□ 3.53
P04214 Gm15042-201ENSMUST00000120212 883 ntBASIC36.92■■■■□ 3.5
P04214 Gm15045-201ENSMUST00000117359 883 ntBASIC36.05■■■■□ 3.36
P04214 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.05■■■■□ 3.36
P04214 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
P04214 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
P04214 Gm23366-201ENSMUST00000175022 89 ntBASIC35.57■■■■□ 3.28
P04214 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
P04214 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.78■■■■□ 3.16
P04214 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
P04214 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
P04214 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.45■■■■□ 3.11
P04214 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
P04214 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
P04214 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
P04214 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
P04214 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
P04214 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
P04214 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
P04214 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.82■■■■□ 3
P04214 Gm25238-201ENSMUST00000174914 89 ntBASIC33.81■■■■□ 3
P04214 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
P04214 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
P04214 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
P04214 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.3■■■□□ 2.92
P04214 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
P04214 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
P04214 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
P04214 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
P04214 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
P04214 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
P04214 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
P04214 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.74■■■□□ 2.83
P04214 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.72■■■□□ 2.83
P04214 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.68■■■□□ 2.82
P04214 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
P04214 Gm25262-201ENSMUST00000174934 133 ntBASIC32.56■■■□□ 2.8
P04214 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
P04214 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.37■■■□□ 2.77
P04214 Gm27325-201ENSMUST00000175467 74 ntBASIC32.3■■■□□ 2.76
P04214 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
P04214 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
P04214 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.09■■■□□ 2.73
P04214 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
P04214 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
P04214 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.97■■■□□ 2.71
P04214 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.96■■■□□ 2.71
P04214 Rab21-202ENSMUST00000218831 843 ntBASIC31.94■■■□□ 2.7
P04214 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
P04214 Gm26115-201ENSMUST00000175605 87 ntBASIC31.9■■■□□ 2.7
P04214 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.89■■■□□ 2.7
P04214 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
P04214 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
P04214 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
P04214 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
P04214 Gm8109-201ENSMUST00000194076 746 ntBASIC31.67■■■□□ 2.66
P04214 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
P04214 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
P04214 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.58■■■□□ 2.65
P04214 Psd-208ENSMUST00000224556 2034 ntBASIC31.57■■■□□ 2.64
P04214 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
P04214 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.53■■■□□ 2.64
P04214 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
P04214 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.36■■■□□ 2.61
P04214 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.3■■■□□ 2.6
P04214 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
P04214 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
P04214 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
P04214 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.23■■■□□ 2.59
P04214 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.18■■■□□ 2.58
P04214 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
P04214 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
P04214 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
P04214 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
P04214 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
P04214 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
P04214 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
P04214 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
P04214 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
P04214 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.88■■■□□ 2.53
P04214 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.84■■■□□ 2.53
P04214 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.81■■■□□ 2.52
P04214 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
P04214 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.72■■■□□ 2.51
P04214 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
P04214 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
P04214 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
P04214 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.65■■■□□ 2.5
P04214 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
P04214 Gm24804-201ENSMUST00000174982 85 ntBASIC30.63■■■□□ 2.49
P04214 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
P04214 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
P04214 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
P04214 Gm27322-201ENSMUST00000184007 104 ntBASIC30.58■■■□□ 2.49
P04214 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.5■■■□□ 2.47
P04214 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
P04214 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms