Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Gm25239-201ENSMUST00000174915 86 ntBASIC39.5■■■■□ 3.91
Ccdc187Q8C5V8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Ccdc187Q8C5V8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Ccdc187Q8C5V8 Gm15042-201ENSMUST00000120212 883 ntBASIC34.47■■■■□ 3.11
Ccdc187Q8C5V8 Gm24109-201ENSMUST00000175489 103 ntBASIC34.26■■■■□ 3.08
Ccdc187Q8C5V8 Gm15045-201ENSMUST00000117359 883 ntBASIC33.71■■■□□ 2.99
Ccdc187Q8C5V8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Ccdc187Q8C5V8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Ccdc187Q8C5V8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Ccdc187Q8C5V8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Ccdc187Q8C5V8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ccdc187Q8C5V8 Gm23366-201ENSMUST00000175022 89 ntBASIC32.99■■■□□ 2.87
Ccdc187Q8C5V8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ccdc187Q8C5V8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
Ccdc187Q8C5V8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ccdc187Q8C5V8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.95■■■□□ 2.71
Ccdc187Q8C5V8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Ccdc187Q8C5V8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccdc187Q8C5V8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.75■■■□□ 2.67
Ccdc187Q8C5V8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc187Q8C5V8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.73■■■□□ 2.67
Ccdc187Q8C5V8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
Ccdc187Q8C5V8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccdc187Q8C5V8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc187Q8C5V8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc187Q8C5V8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc187Q8C5V8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc187Q8C5V8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccdc187Q8C5V8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ccdc187Q8C5V8 Gm25238-201ENSMUST00000174914 89 ntBASIC31.22■■■□□ 2.59
Ccdc187Q8C5V8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.2■■■□□ 2.59
Ccdc187Q8C5V8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc187Q8C5V8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc187Q8C5V8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.13■■■□□ 2.57
Ccdc187Q8C5V8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc187Q8C5V8 Psd-208ENSMUST00000224556 2034 ntBASIC30.81■■■□□ 2.52
Ccdc187Q8C5V8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc187Q8C5V8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
Ccdc187Q8C5V8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.52■■■□□ 2.48
Ccdc187Q8C5V8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc187Q8C5V8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.41■■■□□ 2.46
Ccdc187Q8C5V8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc187Q8C5V8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.26■■■□□ 2.43
Ccdc187Q8C5V8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Ccdc187Q8C5V8 Gm27325-201ENSMUST00000175467 74 ntBASIC30.22■■■□□ 2.43
Ccdc187Q8C5V8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc187Q8C5V8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc187Q8C5V8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc187Q8C5V8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.06■■■□□ 2.4
Ccdc187Q8C5V8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Ccdc187Q8C5V8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.96■■■□□ 2.39
Ccdc187Q8C5V8 Gm25262-201ENSMUST00000174934 133 ntBASIC29.92■■■□□ 2.38
Ccdc187Q8C5V8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ccdc187Q8C5V8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.74■■■□□ 2.35
Ccdc187Q8C5V8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc187Q8C5V8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.72■■■□□ 2.35
Ccdc187Q8C5V8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc187Q8C5V8 Rab21-202ENSMUST00000218831 843 ntBASIC29.69■■■□□ 2.34
Ccdc187Q8C5V8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc187Q8C5V8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.61■■■□□ 2.33
Ccdc187Q8C5V8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc187Q8C5V8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc187Q8C5V8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.46■■■□□ 2.31
Ccdc187Q8C5V8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ccdc187Q8C5V8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.3
Ccdc187Q8C5V8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Ccdc187Q8C5V8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Ccdc187Q8C5V8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Ccdc187Q8C5V8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.33■■■□□ 2.29
Ccdc187Q8C5V8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.32■■■□□ 2.28
Ccdc187Q8C5V8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ccdc187Q8C5V8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.28■■■□□ 2.28
Ccdc187Q8C5V8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ccdc187Q8C5V8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Ccdc187Q8C5V8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ccdc187Q8C5V8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ccdc187Q8C5V8 Gm26115-201ENSMUST00000175605 87 ntBASIC29.19■■■□□ 2.26
Ccdc187Q8C5V8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ccdc187Q8C5V8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ccdc187Q8C5V8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ccdc187Q8C5V8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc187Q8C5V8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ccdc187Q8C5V8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ccdc187Q8C5V8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ccdc187Q8C5V8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ccdc187Q8C5V8 Gm8109-201ENSMUST00000194076 746 ntBASIC29.01■■■□□ 2.23
Ccdc187Q8C5V8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.01■■■□□ 2.23
Ccdc187Q8C5V8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ccdc187Q8C5V8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ccdc187Q8C5V8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.95■■■□□ 2.22
Ccdc187Q8C5V8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.95■■■□□ 2.22
Ccdc187Q8C5V8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ccdc187Q8C5V8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ccdc187Q8C5V8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ccdc187Q8C5V8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.82■■■□□ 2.2
Ccdc187Q8C5V8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.79■■■□□ 2.2
Ccdc187Q8C5V8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ccdc187Q8C5V8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.77■■■□□ 2.2
Ccdc187Q8C5V8 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.77■■■□□ 2.2
Ccdc187Q8C5V8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms