RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 C15orf54Q8N8G6 183 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 OR1F12Q8NHA8 337 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SCARB1Q8WTV0 552 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 ERGIC1Q969X5 290 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 FAM46AQ96IP4 442 aaKnown RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 SMIM8Q96KF7 97 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 TMEM56Q96MV1 263 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 NEDD4LQ96PU5 975 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 CHST5Q9GZS9 411 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 TUBA4BQ9H853 241 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 FAM118AQ9NWS6 357 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 IL20RAQ9UHF4 553 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 TMEM56-RWDD3S4R434 201 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 NBEAL2Q6ZNJ1 2754 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 TRAPPC2LH3BP13 241 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 BHLHE40O14503 412 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 TIMM8AO60220 97 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 SLC16A7O60669 478 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 NGFP01138 241 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 APOC3P02656 99 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 STAG3L2P0CL84 134 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 IGHV4-38-2P0DP08 117 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 MPV17P39210 176 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 MTNR1AP48039 350 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 ATP5IP56385 69 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 SEC61A1P61619 476 aaKnown RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 SELENOTP62341 195 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 FABP9Q0Z7S8 132 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 MADCAM1Q13477 382 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 SPRNQ5BIV9 151 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 FAM74A1Q5RGS3 127 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 LRRC28Q86X40 367 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 MUC20Q8N307 709 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 COMMD1Q8N668 190 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 ACBD7Q8N6N7 88 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 CLDN22Q8N7P3 220 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 OR5M8Q8NGP6 311 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 OR13G1Q8NGZ3 307 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 ZNF596Q8TC21 504 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 PHYHIPQ92561 330 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 ORAI1Q96D31 301 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 SYT4Q9H2B2 425 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 MUC13Q9H3R2 512 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 ADA2Q9NZK5 511 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 B9D1Q9UPM9 204 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 COA3Q9Y2R0 106 aaPredicted RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 NOP16Q9Y3C1 178 aaKnown RBP7.15□□□□□ -1.26
GPC6-202ENST00000617456 NPTNQ9Y639 398 aa7.15□□□□□ -1.26
GPC6-202ENST00000617456 IGLV1-36A0A0B4J1U3 117 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 TRBV4-1A0A0J9YWV2 114 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 COLCA2A8K830 154 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 CLDN34H7C241 214 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 M0QZ24 198 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 CDIPTO14735 213 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 RGS10O43665 173 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 SC5DO75845 299 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 PPP1R3DO95685 299 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 RENP00797 406 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 SCG5P05408 212 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 FABP3P05413 133 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 CLEC3BP05452 202 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 NQO2P16083 231 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 NCK1P16333 377 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 GGT2P36268 569 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 CDKN2AP42771 156 aaKnown RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 GATA4P43694 442 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 MAP2K4P45985 399 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 RAG2P55895 527 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 FXYD6P3P58550 94 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 TNFAIP6P98066 277 aaPredicted RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 SPIBQ01892 262 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 ATP6V1FQ16864 119 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 KRTAP27-1Q3LI81 207 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 LGALSLQ3ZCW2 172 aaPredicted RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 TMEM255AQ5JRV8 349 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 OR8G5Q8NG78 346 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 OR52E2Q8NGJ4 325 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 GNPDA2Q8TDQ7 276 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 RXFP4Q8TDU9 374 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 FBLIM1Q8WUP2 373 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 GLMPQ8WWB7 406 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 ACOT12Q8WYK0 555 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 UBE2FQ969M7 185 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 CMBLQ96DG6 245 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 ZNF582Q96NG8 517 aaPredicted RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 ERMAPQ96PL5 475 aaPredicted RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 SLC30A2Q9BRI3 323 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 DPCDQ9BVM2 203 aaPredicted RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 JAM3Q9BX67 310 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 OR52D1Q9H346 318 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 BEX1Q9HBH7 125 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 TMEM138Q9NPI0 162 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 TMEM106BQ9NUM4 274 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 USE1Q9NZ43 259 aa7.14□□□□□ -1.27
GPC6-202ENST00000617456 RCC2Q9P258 522 aaKnown RBP7.14□□□□□ -1.27
GPC6-202ENST00000617456 PPP1R3CQ9UQK1 317 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms