RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 HMG20AQ9NP66 347 aa8.4□□□□□ -1.06
SHMT2-224ENST00000556737 FAM96BQ9Y3D0 163 aa8.4□□□□□ -1.06
SHMT2-224ENST00000556737 MEGF8Q7Z7M0 2845 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 MGAM2Q2M2H8 2515 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 TRBV5-5A0A0J9YX44 114 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 A0A1W2PPH5 198 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 MEGF11A6BM72 1044 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 ODF3BA8MYP8 253 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 SULT1B1O43704 296 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 ALX3O95076 343 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 IL1AP01583 271 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 RBP4P02753 201 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 UCHL1P09936 223 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 CLEC2LP0C7M8 214 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 PRKACAP17612 351 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 COX7A1P24310 79 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 PAX6P26367 422 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 DUSP1P28562 367 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 MTNR1BP49286 362 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 RORCP51449 518 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 SNU13P55769 128 aaKnown RBP8.39□□□□□ -1.07
SHMT2-224ENST00000556737 EDDM3BP56851 147 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 KRTAP10-3P60369 221 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 RPS11P62280 158 aaKnown RBP eCLIP8.39□□□□□ -1.07
SHMT2-224ENST00000556737 EDDM3AQ14507 147 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 SPIN3Q5JUX0 258 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 LDLRAD2Q5SZI1 272 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 OLFML2AQ68BL7 652 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 ZNF782Q6ZMW2 699 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-224ENST00000556737 TPRX1Q8N7U7 411 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 OR4S1Q8NGB4 309 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 OR51A2Q8NGJ7 313 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 PHYHIPQ92561 330 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 SNX22Q96L94 193 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 CHST6Q9GZX3 395 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 TAS2R4Q9NYW5 299 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 PTTG2Q9NZH5 202 aa8.39□□□□□ -1.07
SHMT2-224ENST00000556737 A0A1B0GUS0 222 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 H3BUX3 64 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 SC5DO75845 299 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 OR2H2O95918 312 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 PAHP00439 452 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 CRYBA1P05813 215 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 HCKP08631 526 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 ZNF728P0DKX0 622 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 IGHV1-8P0DP01 117 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 SRMP19623 302 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 RAB3BP20337 219 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 PROK1P58294 105 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 MEF2CQ06413 473 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 SRSF4Q08170 494 aaKnown RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 GRK1Q15835 563 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 IDNKQ5T6J7 187 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 UNQ9370/PRO34162Q6UXP9 181 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 Q6ZSV7 163 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 GDPD3Q7L5L3 318 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 LHFPL4Q7Z7J7 247 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 SERPINA12Q8IW75 414 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 SAXO1Q8IYX7 474 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 ZSCAN4Q8NAM6 433 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 OR5R1Q8NH85 324 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 MCFD2Q8NI22 146 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 CITED1Q99966 193 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 MEGF9Q9H1U4 602 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 PPIL3Q9H2H8 161 aaKnown RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 HEXA-AS1Q9H8Q6 139 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 NEK6Q9HC98 313 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
SHMT2-224ENST00000556737 LINC00312Q9Y6C7 94 aa8.38□□□□□ -1.07
SHMT2-224ENST00000556737 TRBV5-7A0A0A0MS05 114 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 FAM90A8PA6NJQ4 464 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 SIRPB1O00241 398 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 MGST3O14880 152 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 PIN1P1O15428 100 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 MAGEB3O15480 346 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 CYB5AP00167 134 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 RAB3AP20336 220 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 GABRR1P24046 479 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 P2RX3P56373 397 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 KISS1Q15726 138 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 AANATQ16613 207 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 LRRC75BQ2VPJ9 315 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 ZNF626Q68DY1 528 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-224ENST00000556737 Q6P435 159 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 DYNAPQ8N1N2 210 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 OR5D14Q8NGL3 314 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 AP3S1Q92572 193 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 ZNF714Q96N38 554 aa8.37□□□□□ -1.07
SHMT2-224ENST00000556737 NKX3-1Q99801 234 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms