RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CSF1P09603 554 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 CGB3P0DN86 165 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 CGB7P0DN87 165 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 GZMHP20718 246 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 BDKRB2P30411 391 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
SGCE-208ENST00000450385 SNU13P55769 128 aaKnown RBP12.91□□□□□ -0.34
SGCE-208ENST00000450385 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
SGCE-208ENST00000450385 SLC34A1Q06495 639 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 C8orf59Q8N0T1 100 aaPredicted RBP12.91□□□□□ -0.34
SGCE-208ENST00000450385 TNFAIP8L1Q8WVP5 186 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 GHSRQ92847 366 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 LIN7BQ9HAP6 207 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 TRBV5-5A0A0J9YX44 114 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 GABRPO00591 440 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 CHST1O43916 411 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 CALCBP10092 127 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 CAPGP40121 348 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 ST3GAL4Q11206 333 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 Q499Y3 187 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 PAN3Q58A45 887 aaKnown RBP12.9□□□□□ -0.34
SGCE-208ENST00000450385 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
SGCE-208ENST00000450385 ZNF485Q8NCK3 441 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 OR9G1Q8NH87 305 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 RGP1Q92546 391 aaPredicted RBP12.9□□□□□ -0.34
SGCE-208ENST00000450385 COQ2Q96H96 371 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 ZNF702PQ9H963 129 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 AMMECR1Q9Y4X0 333 aaPredicted RBP12.9□□□□□ -0.34
SGCE-208ENST00000450385 HILPDAQ9Y5L2 63 aa12.9□□□□□ -0.34
SGCE-208ENST00000450385 TRAV24A0A0B4J272 114 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 BUB1B-PAK6H3BSN5 160 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 M0QZK8 103 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
SGCE-208ENST00000450385 FSTP19883 344 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 MNDAP41218 407 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 SOX2P48431 317 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RAB13P51153 203 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RIPK1Q13546 671 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RCN1Q15293 331 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 LRRC36Q1X8D7 754 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 HLA-DRB5Q30154 266 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 OGFRL1Q5TC84 451 aaPredicted RBP12.89□□□□□ -0.35
SGCE-208ENST00000450385 OR2G6Q5TZ20 316 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RNLSQ5VYX0 342 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RNF144BQ7Z419 303 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 OSR2Q8N2R0 312 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 KLHDC1Q8N7A1 406 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 FBLIM1Q8WUP2 373 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 CAPSLQ8WWF8 208 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 GGHQ92820 318 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 DCLRE1BQ9H816 532 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 RAB9BQ9NP90 201 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 TAS2R4Q9NYW5 299 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 ST3GAL6Q9Y274 331 aa12.89□□□□□ -0.35
SGCE-208ENST00000450385 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 LY6LH3BQJ8 138 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 WIPF1O43516 503 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 MMP23AO75900 390 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 GTF2F2P13984 249 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 C17orf58Q2M2W7 97 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 PRAMEF5Q5TYX0 476 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 NR1H4Q96RI1 486 aaPredicted RBP12.88□□□□□ -0.35
SGCE-208ENST00000450385 NKX3-1Q99801 234 aaPredicted RBP12.88□□□□□ -0.35
SGCE-208ENST00000450385 WNT10AQ9GZT5 417 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 SERTAD4Q9NUC0 356 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 PSORS1C1Q9UIG5 152 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
SGCE-208ENST00000450385 MEIKINA0A087WXM9 373 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 MEX3AA1L020 520 aaKnown RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 PEX14O75381 377 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 HTR3BO95264 441 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 CLIC3O95833 236 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 IL1AP01583 271 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 OPN1MWP04001 364 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 GLAP06280 429 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 OPN1MW2P0DN77 364 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 OPN1MW3P0DN78 364 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 PAX6P26367 422 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 MAPK3P27361 379 aaPredicted RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 RBM11P57052 281 aaKnown RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 DEFA6Q01524 100 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 ATXN7L3Q14CW9 347 aaPredicted RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 XAF1Q6GPH4 301 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 STX19Q8N4C7 294 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 OR52M1Q8NGK5 317 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 WIPF2Q8TF74 440 aaPredicted RBP12.87□□□□□ -0.35
SGCE-208ENST00000450385 KIRREL1Q96J84 757 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 PGLYRP3Q96LB9 341 aa12.87□□□□□ -0.35
SGCE-208ENST00000450385 DPCDQ9BVM2 203 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms