RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W MPD2Q99316 277 aa3.67□□□□□ -1.82
MRPL40YPL173W ATP4P05626 244 aa3.66□□□□□ -1.82
MRPL40YPL173W RPS21AP0C0V8 87 aaKnown RBP3.66□□□□□ -1.82
MRPL40YPL173W VPS34P22543 875 aa3.66□□□□□ -1.82
MRPL40YPL173W HEM12P32347 362 aaPredicted RBP3.66□□□□□ -1.82
MRPL40YPL173W SER1P33330 395 aaKnown RBP3.66□□□□□ -1.82
MRPL40YPL173W OAF3P36023 863 aa3.66□□□□□ -1.82
MRPL40YPL173W MNN4P36044 1178 aa3.66□□□□□ -1.82
MRPL40YPL173W DID4P36108 232 aa3.66□□□□□ -1.82
MRPL40YPL173W UBS1P38290 277 aa3.66□□□□□ -1.82
MRPL40YPL173W TDA3P38758 523 aa3.66□□□□□ -1.82
MRPL40YPL173W PZF1P39933 429 aa3.66□□□□□ -1.82
MRPL40YPL173W PEA2P40091 420 aa3.66□□□□□ -1.82
MRPL40YPL173W PFA3P42836 336 aa3.66□□□□□ -1.82
MRPL40YPL173W OSW1Q08692 278 aa3.66□□□□□ -1.82
MRPL40YPL173W APM4Q99186 491 aa3.66□□□□□ -1.82
MRPL40YPL173W SST2P11972 698 aaKnown RBP3.65□□□□□ -1.83
MRPL40YPL173W FAT1P38225 669 aa3.65□□□□□ -1.83
MRPL40YPL173W SAK1P38990 1142 aa3.65□□□□□ -1.83
MRPL40YPL173W PAC2P39937 518 aa3.65□□□□□ -1.83
MRPL40YPL173W YFL052WP43551 465 aa3.65□□□□□ -1.83
MRPL40YPL173W YJR039WP47107 1121 aa3.65□□□□□ -1.83
MRPL40YPL173W BPL1P48445 690 aaPredicted RBP3.65□□□□□ -1.83
MRPL40YPL173W PCL10P53124 433 aa3.65□□□□□ -1.83
MRPL40YPL173W YAP1802P53309 568 aa3.65□□□□□ -1.83
MRPL40YPL173W BRE5P53741 515 aaKnown RBP3.65□□□□□ -1.83
MRPL40YPL173W LEE1Q02799 301 aaKnown RBP3.65□□□□□ -1.83
MRPL40YPL173W RGT2Q12300 763 aa3.65□□□□□ -1.83
MRPL40YPL173W ATG11Q12527 1178 aa3.65□□□□□ -1.83
MRPL40YPL173W RMP1Q12530 201 aa3.65□□□□□ -1.83
MRPL40YPL173W SIR3P06701 978 aa3.64□□□□□ -1.83
MRPL40YPL173W BIT2P38346 545 aa3.64□□□□□ -1.83
MRPL40YPL173W SIC1P38634 284 aa3.64□□□□□ -1.83
MRPL40YPL173W MIP6P38760 659 aaKnown RBP3.64□□□□□ -1.83
MRPL40YPL173W SSZ1P38788 538 aaKnown RBP3.64□□□□□ -1.83
MRPL40YPL173W BEM4P39011 633 aa3.64□□□□□ -1.83
MRPL40YPL173W BAP3P41815 604 aa3.64□□□□□ -1.83
MRPL40YPL173W SSY5P47002 699 aa3.64□□□□□ -1.83
MRPL40YPL173W SKY1Q03656 742 aa3.64□□□□□ -1.83
MRPL40YPL173W SWI6P09959 803 aa3.63□□□□□ -1.83
MRPL40YPL173W COX11P19516 300 aaKnown RBP3.63□□□□□ -1.83
MRPL40YPL173W RGT1P32862 1170 aa3.63□□□□□ -1.83
MRPL40YPL173W SWE1P32944 819 aa3.63□□□□□ -1.83
MRPL40YPL173W VPS24P36095 224 aaKnown RBP3.63□□□□□ -1.83
MRPL40YPL173W RRP8P38961 392 aaKnown RBP3.63□□□□□ -1.83
MRPL40YPL173W BDH2P39713 417 aa3.63□□□□□ -1.83
MRPL40YPL173W STB2P46679 850 aa3.63□□□□□ -1.83
MRPL40YPL173W MET14Q02196 202 aa3.63□□□□□ -1.83
MRPL40YPL173W YHM2Q04013 314 aa3.63□□□□□ -1.83
MRPL40YPL173W PHM6Q05637 104 aa3.63□□□□□ -1.83
MRPL40YPL173W GAL1P04385 528 aa3.62□□□□□ -1.83
MRPL40YPL173W ATP12P22135 325 aa3.62□□□□□ -1.83
MRPL40YPL173W PTP1P25044 335 aa3.62□□□□□ -1.83
MRPL40YPL173W PWP2P25635 923 aaKnown RBP3.62□□□□□ -1.83
MRPL40YPL173W SEC65P29478 273 aa3.62□□□□□ -1.83
MRPL40YPL173W AKL1P38080 1108 aaKnown RBP3.62□□□□□ -1.83
MRPL40YPL173W MAL31P38156 614 aa3.62□□□□□ -1.83
MRPL40YPL173W FUI1P38196 639 aa3.62□□□□□ -1.83
MRPL40YPL173W IES5P40060 125 aa3.62□□□□□ -1.83
MRPL40YPL173W LTP1P40347 161 aa3.62□□□□□ -1.83
MRPL40YPL173W RSC8P43609 557 aaKnown RBP3.62□□□□□ -1.83
MRPL40YPL173W PIP2P52960 996 aa3.62□□□□□ -1.83
MRPL40YPL173W ECM38Q05902 660 aaPredicted RBP3.62□□□□□ -1.83
MRPL40YPL173W YPR027CQ12079 277 aa3.62□□□□□ -1.83
MRPL40YPL173W NIC96P34077 839 aa3.61□□□□□ -1.83
MRPL40YPL173W GLG1P36143 616 aa3.61□□□□□ -1.83
MRPL40YPL173W TRZ1P36159 838 aaPredicted RBP3.61□□□□□ -1.83
MRPL40YPL173W ARG2P40360 574 aa3.61□□□□□ -1.83
MRPL40YPL173W NET1P47035 1189 aa3.61□□□□□ -1.83
MRPL40YPL173W MRK1P50873 501 aa3.61□□□□□ -1.83
MRPL40YPL173W MPS1P54199 764 aa3.61□□□□□ -1.83
MRPL40YPL173W PTA1Q01329 785 aaPredicted RBP3.61□□□□□ -1.83
MRPL40YPL173W TDA9Q04545 1251 aa3.61□□□□□ -1.83
MRPL40YPL173W NYV1Q12255 253 aa3.61□□□□□ -1.83
MRPL40YPL173W PYC1P11154 1178 aaKnown RBP3.6□□□□□ -1.83
MRPL40YPL173W KAR1P11927 433 aa3.6□□□□□ -1.83
MRPL40YPL173W CDC26P14724 124 aa3.6□□□□□ -1.83
MRPL40YPL173W KCC4P25389 1037 aa3.6□□□□□ -1.83
MRPL40YPL173W REV7P38927 245 aa3.6□□□□□ -1.83
MRPL40YPL173W GID8P40208 455 aa3.6□□□□□ -1.83
MRPL40YPL173W SLD3P53135 668 aa3.6□□□□□ -1.83
MRPL40YPL173W SPC105P53148 917 aa3.6□□□□□ -1.83
MRPL40YPL173W UBX4P54730 416 aa3.6□□□□□ -1.83
MRPL40YPL173W YLR407WQ06070 228 aa3.6□□□□□ -1.83
MRPL40YPL173W PEX15Q08215 383 aa3.6□□□□□ -1.83
MRPL40YPL173W CIR2Q08822 631 aa3.6□□□□□ -1.83
MRPL40YPL173W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
MRPL40YPL173W PGI1P12709 554 aaKnown RBP3.59□□□□□ -1.83
MRPL40YPL173W GLN4P13188 809 aaKnown RBP3.59□□□□□ -1.83
MRPL40YPL173W YEF3P16521 1044 aaKnown RBP3.59□□□□□ -1.83
MRPL40YPL173W YKU70P32807 602 aa3.59□□□□□ -1.83
MRPL40YPL173W YHR202WP38887 602 aa3.59□□□□□ -1.83
MRPL40YPL173W EMP65P40085 556 aa3.59□□□□□ -1.83
MRPL40YPL173W VID28P40547 921 aa3.59□□□□□ -1.83
MRPL40YPL173W SET2P46995 733 aaKnown RBP3.59□□□□□ -1.83
MRPL40YPL173W MTR3P48240 250 aaPredicted RBP3.59□□□□□ -1.83
MRPL40YPL173W CTR1P49573 406 aa3.59□□□□□ -1.83
MRPL40YPL173W NOP15P53927 220 aaPredicted RBP3.59□□□□□ -1.83
MRPL40YPL173W RRP6Q12149 733 aaKnown RBP3.59□□□□□ -1.83
MRPL40YPL173W YKL033W-AQ86ZR7 236 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms