RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	HFD1	Q04458	532 aa		3.71	□□□□□ -1.82
LEE1	YPL054W	RKI1	Q12189	258 aa		3.71	□□□□□ -1.82
LEE1	YPL054W	ERG20	P08524	352 aa	Known RBP	3.7	□□□□□ -1.82
LEE1	YPL054W	SRD1	P09007	221 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	YIL077C	P40508	320 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	ATG36	P46983	293 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	RFX1	P48743	811 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	DIP5	P53388	608 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	BRE5	P53741	515 aa	Known RBP	3.7	□□□□□ -1.82
LEE1	YPL054W	GPD1	Q00055	391 aa	Known RBP	3.7	□□□□□ -1.82
LEE1	YPL054W	LEE1	Q02799	301 aa	Known RBP	3.7	□□□□□ -1.82
LEE1	YPL054W	COG8	Q04632	607 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	POM34	Q12445	299 aa		3.7	□□□□□ -1.82
LEE1	YPL054W	HOT13	P36078	116 aa		3.69	□□□□□ -1.82
LEE1	YPL054W	SSZ1	P38788	538 aa	Known RBP	3.69	□□□□□ -1.82
LEE1	YPL054W	YDR179W-A	Q03983	463 aa		3.69	□□□□□ -1.82
LEE1	YPL054W	UFO1	Q04511	668 aa		3.69	□□□□□ -1.82
LEE1	YPL054W	ORM2	Q06144	216 aa		3.69	□□□□□ -1.82
LEE1	YPL054W	ISA1	Q07821	250 aa	Predicted RBP	3.69	□□□□□ -1.82
LEE1	YPL054W	KIN82	P25341	720 aa		3.68	□□□□□ -1.82
LEE1	YPL054W	MNN4	P36044	1178 aa		3.68	□□□□□ -1.82
LEE1	YPL054W	AKL1	P38080	1108 aa	Known RBP	3.68	□□□□□ -1.82
LEE1	YPL054W	COS111	P38308	924 aa		3.68	□□□□□ -1.82
LEE1	YPL054W	ULP2	P40537	1034 aa	Predicted RBP	3.68	□□□□□ -1.82
LEE1	YPL054W	YFT2	Q06676	274 aa		3.68	□□□□□ -1.82
LEE1	YPL054W	MBR1	P23493	339 aa		3.67	□□□□□ -1.82
LEE1	YPL054W	STB2	P46679	850 aa		3.67	□□□□□ -1.82
LEE1	YPL054W	YJR039W	P47107	1121 aa		3.67	□□□□□ -1.82
LEE1	YPL054W	DAK1	P54838	584 aa	Known RBP	3.67	□□□□□ -1.82
LEE1	YPL054W	STP1	Q00947	519 aa		3.67	□□□□□ -1.82
LEE1	YPL054W	MSS1	P32559	526 aa	Predicted RBP	3.66	□□□□□ -1.82
LEE1	YPL054W	SRP40	P32583	406 aa	Predicted RBP	3.66	□□□□□ -1.82
LEE1	YPL054W	TIM23	P32897	222 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	YEL1	P34225	687 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	YHR202W	P38887	602 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	PSA1	P41940	361 aa	Known RBP	3.66	□□□□□ -1.82
LEE1	YPL054W	BPL1	P48445	690 aa	Predicted RBP	3.66	□□□□□ -1.82
LEE1	YPL054W	ARG7	Q04728	441 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	IRC3	Q06683	689 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	VHS3	Q08438	674 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	YOL098C	Q12496	1037 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	AI5_ALPHA	Q9ZZX1	630 aa		3.66	□□□□□ -1.82
LEE1	YPL054W	RPS9B	P05755	195 aa	Known RBP	3.65	□□□□□ -1.83
LEE1	YPL054W	MEF1	P25039	761 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	AAD3	P25612	363 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	PET127	P32606	800 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	THI6	P41835	540 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	BIT61	P47041	543 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	YGL117W	P53133	265 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	SNF12	P53628	566 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	UGO1	Q03327	502 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	RPN4	Q03465	531 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	VBA4	Q04602	768 aa	Known RBP	3.65	□□□□□ -1.83
LEE1	YPL054W	ATG33	Q06485	197 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	VPS36	Q06696	566 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	YLR125W	Q12138	136 aa		3.65	□□□□□ -1.83
LEE1	YPL054W	PEX6	P33760	1030 aa		3.64	□□□□□ -1.83
LEE1	YPL054W	ELF1	P36053	145 aa		3.64	□□□□□ -1.83
LEE1	YPL054W	CPR8	P53728	308 aa		3.64	□□□□□ -1.83
LEE1	YPL054W	IZH3	Q07959	543 aa		3.64	□□□□□ -1.83
LEE1	YPL054W	GIN4	Q12263	1142 aa		3.64	□□□□□ -1.83
LEE1	YPL054W	FRS1	P15624	595 aa	Known RBP	3.63	□□□□□ -1.83
LEE1	YPL054W	PRP22	P24384	1145 aa	Known RBP	3.63	□□□□□ -1.83
LEE1	YPL054W	YPT7	P32939	208 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	YKR075C	P36155	307 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	MAL31	P38156	614 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	AIM14	P53109	570 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	YPL068C	Q02749	293 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	CIR2	Q08822	631 aa		3.63	□□□□□ -1.83
LEE1	YPL054W	HMG1	P12683	1054 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	PCL2	P25693	308 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	MSH2	P25847	964 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	YKL091C	P33324	310 aa	Known RBP	3.62	□□□□□ -1.83
LEE1	YPL054W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.62	□□□□□ -1.83	not detected
LEE1	YPL054W	RIM4	P38741	713 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	PIH1	P38768	344 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	NUP82	P40368	713 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	DCS2	Q12123	353 aa		3.62	□□□□□ -1.83
LEE1	YPL054W	PHO8	P11491	566 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	STE4	P18851	423 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	PCM1	P38628	557 aa	Known RBP	3.61	□□□□□ -1.83
LEE1	YPL054W	NUG1	P40010	520 aa	Known RBP	3.61	□□□□□ -1.83
LEE1	YPL054W	BFA1	P47113	574 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	PIP2	P52960	996 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	TRS23	Q03784	219 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	GEP3	Q08622	556 aa		3.61	□□□□□ -1.83
LEE1	YPL054W	SFL1	P20134	766 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	BEM3	P32873	1128 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	ATP23	P53722	227 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	ORC1	P54784	914 aa	Predicted RBP	3.6	□□□□□ -1.83
LEE1	YPL054W	YMR210W	Q03649	449 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	TDA9	Q04545	1251 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	ZPS1	Q12512	249 aa		3.6	□□□□□ -1.83
LEE1	YPL054W	TUP1	P16649	713 aa		3.59	□□□□□ -1.83
LEE1	YPL054W	PMA2	P19657	947 aa		3.59	□□□□□ -1.83
LEE1	YPL054W	IMG2	P25642	146 aa	Predicted RBP	3.59	□□□□□ -1.83
LEE1	YPL054W	MRPL9	P31334	269 aa		3.59	□□□□□ -1.83
LEE1	YPL054W	THI4	P32318	326 aa		3.59	□□□□□ -1.83
LEE1	YPL054W	EUG1	P32474	517 aa		3.59	□□□□□ -1.83
LEE1	YPL054W	BEM4	P39011	633 aa		3.59	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms