RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C NUP84P52891 726 aa9.2□□□□□ -0.94
PUP1YOR157C YMR187CQ03236 431 aa9.2□□□□□ -0.94
PUP1YOR157C CLU1Q03690 1277 aaKnown RBP9.2□□□□□ -0.94
PUP1YOR157C MLH2Q07980 695 aa9.2□□□□□ -0.94
PUP1YOR157C SAT4P25333 603 aaKnown RBP9.19□□□□□ -0.94
PUP1YOR157C SWI3P32591 825 aa9.19□□□□□ -0.94
PUP1YOR157C PFS1P38872 237 aa9.19□□□□□ -0.94
PUP1YOR157C FLC3P53121 802 aa9.19□□□□□ -0.94
PUP1YOR157C YGR266WP53326 701 aa9.19□□□□□ -0.94
PUP1YOR157C TIM8P57744 87 aa9.19□□□□□ -0.94
PUP1YOR157C DON1Q05610 365 aa9.19□□□□□ -0.94
PUP1YOR157C RGA2Q06407 1009 aa9.19□□□□□ -0.94
PUP1YOR157C ELG1Q12050 791 aa9.19□□□□□ -0.94
PUP1YOR157C SLX4Q12098 748 aa9.19□□□□□ -0.94
PUP1YOR157C CHS2P14180 963 aa9.18□□□□□ -0.94
PUP1YOR157C CBF2P32504 956 aa9.18□□□□□ -0.94
PUP1YOR157C UBP7P40453 1071 aa9.18□□□□□ -0.94
PUP1YOR157C PYK2P52489 506 aaKnown RBP9.18□□□□□ -0.94
PUP1YOR157C AQR1P53943 586 aa9.18□□□□□ -0.94
PUP1YOR157C PIR3Q03180 325 aa9.18□□□□□ -0.94
PUP1YOR157C RTN1Q04947 295 aaKnown RBP9.18□□□□□ -0.94
PUP1YOR157C HRD3Q05787 833 aa9.18□□□□□ -0.94
PUP1YOR157C RCL1Q08096 367 aaPredicted RBP9.18□□□□□ -0.94
PUP1YOR157C CPA2P03965 1118 aaKnown RBP9.17□□□□□ -0.94
PUP1YOR157C ARF2P19146 181 aaKnown RBP9.17□□□□□ -0.94
PUP1YOR157C VBA3P25594 458 aa9.17□□□□□ -0.94
PUP1YOR157C SGE1P33335 543 aa9.17□□□□□ -0.94
PUP1YOR157C VBA5P36172 582 aa9.17□□□□□ -0.94
PUP1YOR157C PSY2P40164 858 aa9.17□□□□□ -0.94
PUP1YOR157C SUM1P46676 1062 aa9.17□□□□□ -0.94
PUP1YOR157C LCB4Q12246 624 aa9.17□□□□□ -0.94
PUP1YOR157C GIS3Q12418 502 aa9.17□□□□□ -0.94
PUP1YOR157C YBR056W-AI2HB52 66 aa9.16□□□□□ -0.94
PUP1YOR157C CAP1P28495 268 aaKnown RBP9.16□□□□□ -0.94
PUP1YOR157C HSP78P33416 811 aa9.16□□□□□ -0.94
PUP1YOR157C ECM13P38195 257 aa9.16□□□□□ -0.94
PUP1YOR157C ERV46P39727 415 aa9.16□□□□□ -0.94
PUP1YOR157C RSM25P40496 264 aa9.16□□□□□ -0.94
PUP1YOR157C IML2P47031 731 aa9.16□□□□□ -0.94
PUP1YOR157C VTC4P47075 721 aa9.16□□□□□ -0.94
PUP1YOR157C COQ5P49017 307 aa9.16□□□□□ -0.94
PUP1YOR157C NRM1P53718 249 aa9.16□□□□□ -0.94
PUP1YOR157C IWR1Q07532 353 aaPredicted RBP9.16□□□□□ -0.94
PUP1YOR157C RSB1Q08417 382 aa9.16□□□□□ -0.94
PUP1YOR157C TCO89Q08921 799 aa9.16□□□□□ -0.94
PUP1YOR157C YPL216WQ08964 1102 aa9.16□□□□□ -0.94
PUP1YOR157C YIL046W-AQ3E7Z4 54 aa9.16□□□□□ -0.94
PUP1YOR157C ADE3P07245 946 aaKnown RBP9.15□□□□□ -0.94
PUP1YOR157C PGI1P12709 554 aaKnown RBP9.15□□□□□ -0.94
PUP1YOR157C PMI40P29952 429 aaKnown RBP9.15□□□□□ -0.94
PUP1YOR157C PEX14P53112 341 aa9.15□□□□□ -0.94
PUP1YOR157C CSL4P53859 292 aaPredicted RBP9.15□□□□□ -0.94
PUP1YOR157C YLR456WQ06199 204 aa9.15□□□□□ -0.94
PUP1YOR157C ENO2P00925 437 aaKnown RBP9.14□□□□□ -0.95
PUP1YOR157C RNR2P09938 399 aaKnown RBP9.14□□□□□ -0.95
PUP1YOR157C RPL1AP0CX43 217 aaKnown RBP9.14□□□□□ -0.95
PUP1YOR157C RPL1BP0CX44 217 aaKnown RBP9.14□□□□□ -0.95
PUP1YOR157C CDC42P19073 191 aa9.14□□□□□ -0.95
PUP1YOR157C YJU3P28321 313 aa9.14□□□□□ -0.95
PUP1YOR157C SAK1P38990 1142 aa9.14□□□□□ -0.95
PUP1YOR157C SUN4P53616 420 aa9.14□□□□□ -0.95
PUP1YOR157C FAR11P53917 953 aa9.14□□□□□ -0.95
PUP1YOR157C YMR206WQ03695 313 aa9.14□□□□□ -0.95
PUP1YOR157C NDD1Q08887 554 aa9.14□□□□□ -0.95
PUP1YOR157C YPL150WQ12152 901 aa9.14□□□□□ -0.95
PUP1YOR157C COX3P00420 269 aa9.13□□□□□ -0.95
PUP1YOR157C RPL19AP0CX82 189 aaKnown RBP9.13□□□□□ -0.95
PUP1YOR157C RPL19BP0CX83 189 aaPredicted RBP9.13□□□□□ -0.95
PUP1YOR157C ERG6P25087 383 aaKnown RBP9.13□□□□□ -0.95
PUP1YOR157C SNF7P39929 240 aaKnown RBP9.13□□□□□ -0.95
PUP1YOR157C PFD1P46988 109 aa9.13□□□□□ -0.95
PUP1YOR157C RPA49Q01080 415 aaPredicted RBP9.13□□□□□ -0.95
PUP1YOR157C SPG3Q04398 127 aaPredicted RBP9.13□□□□□ -0.95
PUP1YOR157C ECM38Q05902 660 aaPredicted RBP9.13□□□□□ -0.95
PUP1YOR157C YFT2Q06676 274 aa9.13□□□□□ -0.95
PUP1YOR157C OPI10Q08202 246 aa9.13□□□□□ -0.95
PUP1YOR157C MED1Q12321 566 aa9.13□□□□□ -0.95
PUP1YOR157C SEC63P14906 663 aa9.12□□□□□ -0.95
PUP1YOR157C SER33P40510 469 aa9.12□□□□□ -0.95
PUP1YOR157C SBE2P42223 864 aaKnown RBP9.12□□□□□ -0.95
PUP1YOR157C ASG7P46993 209 aa9.12□□□□□ -0.95
PUP1YOR157C YSH1Q06224 779 aaPredicted RBP9.12□□□□□ -0.95
PUP1YOR157C RLP24Q07915 199 aaKnown RBP9.12□□□□□ -0.95
PUP1YOR157C RIP1P08067 215 aa9.11□□□□□ -0.95
PUP1YOR157C STE4P18851 423 aa9.11□□□□□ -0.95
PUP1YOR157C COX11P19516 300 aaKnown RBP9.11□□□□□ -0.95
PUP1YOR157C PYC2P32327 1180 aaKnown RBP9.11□□□□□ -0.95
PUP1YOR157C MAL33P38157 468 aa9.11□□□□□ -0.95
PUP1YOR157C KIC1P38692 1080 aa9.11□□□□□ -0.95
PUP1YOR157C CPR7P47103 393 aa9.11□□□□□ -0.95
PUP1YOR157C YNL144CP53907 740 aa9.11□□□□□ -0.95
PUP1YOR157C STE20Q03497 939 aaKnown RBP9.11□□□□□ -0.95
PUP1YOR157C CDC73Q06697 393 aa9.11□□□□□ -0.95
PUP1YOR157C SUL2Q12325 893 aa9.11□□□□□ -0.95
PUP1YOR157C RKM5Q12367 367 aa9.11□□□□□ -0.95
PUP1YOR157C HFA1P32874 2273 aa9.11□□□□□ -0.95
PUP1YOR157C GAL4P04386 881 aa9.1□□□□□ -0.95
PUP1YOR157C CDC15P27636 974 aa9.1□□□□□ -0.95
PUP1YOR157C TOS3P43637 560 aa9.1□□□□□ -0.95
PUP1YOR157C LCB5Q06147 687 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms