RNA–Protein interactions for RNA: YOR116C

RPO31, Transcript of RNA polymerase III largest subunit C160, yeast

Gene RPO31, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO31	YOR116C	KIP1	P28742	1111 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	BIO2	P32451	375 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	SLA1	P32790	1244 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	PXA2	P34230	853 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	BUD16	P39988	312 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	HUL4	P40985	892 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	ALB1	P47019	175 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	HLJ1	P48353	224 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	ZIP2	P53061	704 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	COP1	P53622	1201 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	AAD15	Q08361	143 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	RSB1	Q08417	382 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	SLX4	Q12098	748 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	LDB19	Q12502	818 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	NHA1	Q99271	985 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	DPB2	P24482	689 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	NGR1	P32831	672 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	RPC25	P35718	212 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	SDS22	P36047	338 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	ANR2	P36090	516 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	LAS1	P36146	502 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	CRG1	P38892	291 aa	RIP-Chip data	3.95	□□□□□ -1.78	RIP-Chip
RPO31	YOR116C	PZF1	P39933	429 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	JEM1	P40358	645 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	CCM1	P48237	864 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	YDR338C	Q05497	695 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	SYO1	Q07395	620 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	ISA1	Q07821	250 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	MUM3	Q08750	479 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	AFT2	Q08957	416 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	FCF2	Q12035	217 aa	Predicted RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	HRT3	Q12347	344 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	OCA6	Q12454	224 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	YPT6	Q99260	215 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	THS1	P04801	734 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	SAR1	P20606	190 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	ARG1	P22768	420 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	KNS1	P32350	737 aa	Predicted RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	RGT1	P32862	1170 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	MAL33	P38157	468 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	NQM1	P53228	333 aa	Predicted RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	TIM11	P81449	96 aa	Predicted RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	CWC21	Q03375	135 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	FAR10	Q06001	478 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	YPL260W	Q08977	551 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	CDC19	P00549	500 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	FBA1	P14540	359 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	RVS161	P25343	265 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	ATP3	P38077	311 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	TDP1	P38319	544 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	ALD6	P54115	500 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	HOS1	Q12214	470 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	ATG34	Q12292	412 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	VPS5	Q92331	675 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	AFT1	P22149	690 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	KAR4	P25583	335 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	AFG2	P32794	780 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	MYO3	P36006	1272 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	SPC34	P36131	295 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	RCK2	P38623	610 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	YER034W	P40022	185 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	MRX1	P40050	688 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	YGR035C	P53222	116 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	ADA2	Q02336	434 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	EGD1	Q02642	157 aa	Known RBP	3.94	□□□□□ -1.78
RPO31	YOR116C	UME1	Q03010	460 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	SPP1	Q03012	353 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	TDA1	Q03533	586 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	SGT1	Q08446	395 aa		3.94	□□□□□ -1.78
RPO31	YOR116C	THP2	O13539	261 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	GPH1	P06738	902 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	SRM1	P21827	482 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	PHO87	P25360	923 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SRO9	P25567	434 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	RAM2	P29703	316 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	UTP11	P34247	250 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	MPE1	P35728	441 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	TGL4	P36165	910 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SAF1	P38352	637 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	IAH1	P41734	238 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	RIP-Chip
RPO31	YOR116C	VTC4	P47075	721 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SPC105	P53148	917 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SEC5	P89102	971 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	RPN9	Q04062	393 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	URH1	Q04179	340 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SSQ1	Q05931	657 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	ATG26	Q06321	1198 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	UIP4	Q08926	304 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	MED1	Q12321	566 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SNF1	P06782	633 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	CBP1	P07252	654 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	RSR1	P13856	272 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	CHS2	P14180	963 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	PRP16	P15938	1071 aa	Predicted RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	PRE8	P23639	250 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	SEC1	P30619	724 aa	Known RBP	3.93	□□□□□ -1.78
RPO31	YOR116C	IRE1	P32361	1115 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	COX13	P32799	129 aa		3.93	□□□□□ -1.78
RPO31	YOR116C	TRZ1	P36159	838 aa	Predicted RBP	3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms