RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W PRP28P23394 588 aa3.58□□□□□ -1.84
RRI2YOL117W FEN2P25621 512 aaKnown RBP3.58□□□□□ -1.84
RRI2YOL117W SEC65P29478 273 aa3.58□□□□□ -1.84
RRI2YOL117W CCT7P42943 550 aaKnown RBP3.58□□□□□ -1.84
RRI2YOL117W FAP7Q12055 197 aaPredicted RBP3.58□□□□□ -1.84
RRI2YOL117W MRH1Q12117 320 aaPredicted RBP3.58□□□□□ -1.84
RRI2YOL117W TAF3Q12297 353 aa3.58□□□□□ -1.84
RRI2YOL117W SET3P36124 751 aa3.58□□□□□ -1.84
RRI2YOL117W YEN1P40028 759 aa3.58□□□□□ -1.84
RRI2YOL117W NDC80P40460 691 aa3.58□□□□□ -1.84
RRI2YOL117W UBA2P52488 636 aa3.58□□□□□ -1.84
RRI2YOL117W ATG4P53867 494 aa3.58□□□□□ -1.84
RRI2YOL117W SUT2Q12286 268 aa3.58□□□□□ -1.84
RRI2YOL117W RPS17AP02407 136 aaKnown RBP3.57□□□□□ -1.84
RRI2YOL117W RPS17BP14127 136 aaKnown RBP3.57□□□□□ -1.84
RRI2YOL117W YKR075CP36155 307 aa3.57□□□□□ -1.84
RRI2YOL117W GPP2P40106 250 aaKnown RBP3.57□□□□□ -1.84
RRI2YOL117W DUG1P43616 481 aaKnown RBP3.57□□□□□ -1.84
RRI2YOL117W YFT2Q06676 274 aa3.57□□□□□ -1.84
RRI2YOL117W CLF1Q12309 687 aaPredicted RBP3.57□□□□□ -1.84
RRI2YOL117W TAD3Q9URQ3 322 aa3.57□□□□□ -1.84
RRI2YOL117W ERG20P08524 352 aaKnown RBP3.56□□□□□ -1.84
RRI2YOL117W MF(ALPHA)2P32435 120 aa3.56□□□□□ -1.84
RRI2YOL117W DAL3P32459 195 aa3.56□□□□□ -1.84
RRI2YOL117W EUG1P32474 517 aa3.56□□□□□ -1.84
RRI2YOL117W CDS1P38221 457 aa3.56□□□□□ -1.84
RRI2YOL117W RFX1P48743 811 aa3.56□□□□□ -1.84
RRI2YOL117W YHM2Q04013 314 aa3.56□□□□□ -1.84
RRI2YOL117W CHS5Q12114 671 aaKnown RBP3.56□□□□□ -1.84
RRI2YOL117W GLN4P13188 809 aaKnown RBP3.56□□□□□ -1.84
RRI2YOL117W PRE4P30657 266 aa3.56□□□□□ -1.84
RRI2YOL117W COS111P38308 924 aa3.56□□□□□ -1.84
RRI2YOL117W CBR1P38626 284 aaKnown RBP3.56□□□□□ -1.84
RRI2YOL117W KHA1P40309 873 aa3.56□□□□□ -1.84
RRI2YOL117W YIL077CP40508 320 aa3.56□□□□□ -1.84
RRI2YOL117W VBA4Q04602 768 aaKnown RBP3.56□□□□□ -1.84
RRI2YOL117W ACO1P19414 778 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RRI2YOL117W KIN82P25341 720 aa3.55□□□□□ -1.84
RRI2YOL117W MTC7P32633 139 aa3.55□□□□□ -1.84
RRI2YOL117W SER1P33330 395 aaKnown RBP3.55□□□□□ -1.84
RRI2YOL117W PAF1P38351 445 aa3.55□□□□□ -1.84
RRI2YOL117W PIG2P40187 538 aa3.55□□□□□ -1.84
RRI2YOL117W PXA1P41909 870 aa3.55□□□□□ -1.84
RRI2YOL117W NIT2P47016 307 aa3.55□□□□□ -1.84
RRI2YOL117W MPS3P47069 682 aa3.55□□□□□ -1.84
RRI2YOL117W BFA1P47113 574 aa3.55□□□□□ -1.84
RRI2YOL117W CTR1P49573 406 aa3.55□□□□□ -1.84
RRI2YOL117W VPS73P53142 486 aaKnown RBP3.55□□□□□ -1.84
RRI2YOL117W USV1Q12132 391 aa3.55□□□□□ -1.84
RRI2YOL117W ATP12P22135 325 aa3.54□□□□□ -1.84
RRI2YOL117W CTP1P38152 299 aa3.54□□□□□ -1.84
RRI2YOL117W YBR071WP38243 211 aa3.54□□□□□ -1.84
RRI2YOL117W ENP1P38333 483 aaKnown RBP3.54□□□□□ -1.84
RRI2YOL117W YHR097CP38809 366 aaKnown RBP3.54□□□□□ -1.84
RRI2YOL117W ARG2P40360 574 aa3.54□□□□□ -1.84
RRI2YOL117W VID28P40547 921 aa3.54□□□□□ -1.84
RRI2YOL117W TAH11P47112 604 aa3.54□□□□□ -1.84
RRI2YOL117W PTA1Q01329 785 aaPredicted RBP3.54□□□□□ -1.84
RRI2YOL117W NSE5Q03718 556 aa3.54□□□□□ -1.84
RRI2YOL117W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
RRI2YOL117W GLG1P36143 616 aa3.54□□□□□ -1.84
RRI2YOL117W YJL206CP39529 758 aa3.54□□□□□ -1.84
RRI2YOL117W TAF4P50105 388 aa3.54□□□□□ -1.84
RRI2YOL117W YGR151CP53287 111 aa3.54□□□□□ -1.84
RRI2YOL117W IZH3Q07959 543 aa3.54□□□□□ -1.84
RRI2YOL117W TMA17Q12513 150 aa3.54□□□□□ -1.84
RRI2YOL117W KIN3P22209 435 aa3.53□□□□□ -1.84
RRI2YOL117W PRP22P24384 1145 aaKnown RBP3.53□□□□□ -1.84
RRI2YOL117W TSR4P25040 408 aa3.53□□□□□ -1.84
RRI2YOL117W FUB1P25659 250 aa3.53□□□□□ -1.84
RRI2YOL117W EMP70P32802 667 aa3.53□□□□□ -1.84
RRI2YOL117W BDH2P39713 417 aa3.53□□□□□ -1.84
RRI2YOL117W YJR120WP47157 116 aa3.53□□□□□ -1.84
RRI2YOL117W CRG1P38892 291 aaRIP-Chip data3.52□□□□□ -1.85not detected
RRI2YOL117W STU2P46675 888 aa3.52□□□□□ -1.85
RRI2YOL117W SNF12P53628 566 aa3.52□□□□□ -1.85
RRI2YOL117W COG6P53959 839 aa3.52□□□□□ -1.85
RRI2YOL117W SKY1Q03656 742 aa3.52□□□□□ -1.85
RRI2YOL117W YDL086WQ07505 273 aa3.52□□□□□ -1.85
RRI2YOL117W GMH1P36125 273 aa3.52□□□□□ -1.85
RRI2YOL117W TDP1P38319 544 aa3.52□□□□□ -1.85
RRI2YOL117W DUN1P39009 513 aa3.52□□□□□ -1.85
RRI2YOL117W FTR1P40088 404 aa3.52□□□□□ -1.85
RRI2YOL117W PRM2P40534 656 aa3.52□□□□□ -1.85
RRI2YOL117W YDL183CP48569 320 aa3.52□□□□□ -1.85
RRI2YOL117W SPO1P53541 631 aa3.52□□□□□ -1.85
RRI2YOL117W FDC1Q03034 503 aa3.52□□□□□ -1.85
RRI2YOL117W PPN1Q04119 674 aa3.52□□□□□ -1.85
RRI2YOL117W RPS9BP05755 195 aaKnown RBP3.51□□□□□ -1.85
RRI2YOL117W HXT4P32467 576 aa3.51□□□□□ -1.85
RRI2YOL117W KSP1P38691 1029 aaKnown RBP3.51□□□□□ -1.85
RRI2YOL117W IRC5P43610 853 aa3.51□□□□□ -1.85
RRI2YOL117W HLR1Q04429 423 aa3.51□□□□□ -1.85
RRI2YOL117W CDC43P18898 376 aa3.5□□□□□ -1.85
RRI2YOL117W AEP2P22136 580 aa3.5□□□□□ -1.85
RRI2YOL117W HEM12P32347 362 aaPredicted RBP3.5□□□□□ -1.85
RRI2YOL117W MIT1P40002 666 aa3.5□□□□□ -1.85
RRI2YOL117W YSH1Q06224 779 aaPredicted RBP3.5□□□□□ -1.85
RRI2YOL117W NGL1Q08213 363 aaKnown RBP3.5□□□□□ -1.85
RRI2YOL117W BMS1Q08965 1183 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms