RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	PDC5	P16467	563 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	ESS1	P22696	170 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	MSG5	P38590	489 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	SSZ1	P38788	538 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	CKB2	P38930	258 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	YIL054W	P40524	105 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	CCT7	P42943	550 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	BST1	P43571	1029 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	YJL049W	P47048	450 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	TRF5	P48561	642 aa	Known RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	PRP3	Q03338	469 aa	Predicted RBP	6.25	□□□□□ -1.41
PDR18	YNR070W	YML083C	Q04526	418 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	MNL2	Q12205	849 aa		6.25	□□□□□ -1.41
PDR18	YNR070W	BRF1	P29056	596 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	NAM7	P30771	971 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	YSC83	P32792	385 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	KEL1	P38853	1164 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	RGI2	P40188	164 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	ATG16	Q03818	150 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	RPN5	Q12250	445 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	TRM11	Q12463	433 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	CSR2	Q12734	1121 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	ARG4	P04076	463 aa	Predicted RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	RPL4A	P10664	362 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	CDC24	P11433	854 aa	Predicted RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	REC107	P21651	314 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	SMI1	P32566	505 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	HEL1	P36113	551 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	CIN4	P39110	191 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	SCS2	P40075	244 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	MKT1	P40850	830 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	YGR153W	P48238	217 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	RPL4B	P49626	362 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	MAL13	P53338	473 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	RLI1	Q03195	608 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	SND1	Q04007	877 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	SPG3	Q04398	127 aa	Predicted RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	SRB2	P34162	210 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	EFM5	P53200	248 aa	Known RBP	6.24	□□□□□ -1.41
PDR18	YNR070W	FAR8	Q05040	523 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	RRD2	Q12461	358 aa		6.24	□□□□□ -1.41
PDR18	YNR070W	DED1	P06634	604 aa	Known RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	SNF3	P10870	884 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	COX13	P32799	129 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	NPL6	P32832	435 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	ERG7	P38604	731 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	APE4	P38821	490 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	SCC4	P40090	624 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	ADH4	P10127	382 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	GPA2	P10823	449 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	TGL4	P36165	910 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	EFM1	P38732	585 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	SPC97	P38863	823 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	LCP5	P40079	357 aa	Predicted RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	ESL1	P40456	1118 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	DAK2	P43550	591 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
PDR18	YNR070W	YDR476C	Q03362	224 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	SPH1	Q06160	661 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	DNL4	Q08387	944 aa	Predicted RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	ATG11	Q12527	1178 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	RPL24A	P04449	155 aa	Known RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	BUD14	P27637	709 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	GAC1	P28006	793 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	RGT1	P32862	1170 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	DYS1	P38791	387 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	TRS130	Q03660	1102 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	DOT1	Q04089	582 aa	Known RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	TSR2	Q06672	205 aa	Known RBP	6.23	□□□□□ -1.41
PDR18	YNR070W	ULA1	Q12059	462 aa		6.23	□□□□□ -1.41
PDR18	YNR070W	YMR085W	P0CF18	432 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	SEC15	P22224	910 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
PDR18	YNR070W	NPP2	P39997	493 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	RLP7	P40693	322 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	YJL132W	P47014	750 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	JJJ3	P47138	172 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	SPC24	Q04477	213 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	AIM39	Q08223	395 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	TIF6	Q12522	245 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	SPO11	P23179	398 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	URA7	P28274	579 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	SEC6	P32844	805 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	VMA13	P41807	478 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	UFE1	P41834	346 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	RMD8	P43620	662 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	ULP1	Q02724	621 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	RCR2	Q03446	210 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	RCF1	Q03713	159 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	CSN9	Q03981	162 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	GAD1	Q04792	585 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	CDC73	Q06697	393 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	SGT2	Q12118	346 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	FRT1	Q99332	602 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	POL30	P15873	258 aa	Known RBP	6.22	□□□□□ -1.41
PDR18	YNR070W	IME1	P21190	360 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	BCS1	P32839	456 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	APN2	P38207	520 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	HSL7	P38274	827 aa		6.22	□□□□□ -1.41
PDR18	YNR070W	ERP5	P38819	212 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms