RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C ORM2Q06144 216 aa2.42□□□□□ -2.02
CSF1YLR087C YBL113CQ7M4S9 792 aa2.42□□□□□ -2.02
CSF1YLR087C RAM1P22007 431 aa2.41□□□□□ -2.02
CSF1YLR087C KKQ8P36004 724 aa2.41□□□□□ -2.02
CSF1YLR087C TGL4P36165 910 aa2.41□□□□□ -2.02
CSF1YLR087C BDH2P39713 417 aa2.41□□□□□ -2.02
CSF1YLR087C MRX1P40050 688 aa2.41□□□□□ -2.02
CSF1YLR087C GID8P40208 455 aa2.41□□□□□ -2.02
CSF1YLR087C NMD5P46970 1048 aa2.41□□□□□ -2.02
CSF1YLR087C SPO1P53541 631 aa2.41□□□□□ -2.02
CSF1YLR087C MRPL50P53724 139 aa2.41□□□□□ -2.02
CSF1YLR087C EEB1Q02891 456 aa2.41□□□□□ -2.02
CSF1YLR087C UTP4Q06679 776 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C GET4Q12125 312 aa2.41□□□□□ -2.02
CSF1YLR087C IPP1P00817 287 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C MCM1P11746 286 aa2.41□□□□□ -2.02
CSF1YLR087C KTR1P27810 393 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C TDP1P38319 544 aa2.41□□□□□ -2.02
CSF1YLR087C MVP1P40959 511 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C YMR253CQ04835 414 aa2.41□□□□□ -2.02
CSF1YLR087C REX4Q08237 289 aa2.41□□□□□ -2.02
CSF1YLR087C GUK1P15454 187 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C PMA2P19657 947 aa2.41□□□□□ -2.02
CSF1YLR087C RBK1P25332 333 aa2.41□□□□□ -2.02
CSF1YLR087C VPH1P32563 840 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C LOT5P34234 306 aa2.41□□□□□ -2.02
CSF1YLR087C YKL071WP36086 256 aa2.41□□□□□ -2.02
CSF1YLR087C GCD14P46959 383 aaPredicted RBP2.41□□□□□ -2.02
CSF1YLR087C MND1P53102 219 aa2.41□□□□□ -2.02
CSF1YLR087C SGF73P53165 657 aa2.41□□□□□ -2.02
CSF1YLR087C DID2P69771 204 aa2.41□□□□□ -2.02
CSF1YLR087C YLR053CQ12026 108 aa2.41□□□□□ -2.02
CSF1YLR087C BRR1Q99177 341 aaPredicted RBP2.41□□□□□ -2.02
CSF1YLR087C HIS5P07172 385 aa2.41□□□□□ -2.02
CSF1YLR087C GEX1P25596 615 aa2.41□□□□□ -2.02
CSF1YLR087C MRE11P32829 692 aa2.41□□□□□ -2.02
CSF1YLR087C UTP30P36144 274 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C CCT4P39078 528 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C VMA7P39111 118 aa2.41□□□□□ -2.02
CSF1YLR087C YJL107CP42947 387 aa2.41□□□□□ -2.02
CSF1YLR087C STB4P50104 949 aa2.41□□□□□ -2.02
CSF1YLR087C CIK1Q01649 594 aa2.41□□□□□ -2.02
CSF1YLR087C MUM3Q08750 479 aa2.41□□□□□ -2.02
CSF1YLR087C SKM1Q12469 655 aa2.41□□□□□ -2.02
CSF1YLR087C MRP4P32902 394 aa2.41□□□□□ -2.02
CSF1YLR087C MNS1P32906 549 aa2.41□□□□□ -2.02
CSF1YLR087C LRG1P35688 1017 aa2.41□□□□□ -2.02
CSF1YLR087C PEX32P38292 413 aa2.41□□□□□ -2.02
CSF1YLR087C STM1P39015 273 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C EOS1P53938 366 aa2.41□□□□□ -2.02
CSF1YLR087C BRE1Q07457 700 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C OSH2Q12451 1283 aa2.41□□□□□ -2.02
CSF1YLR087C MST1P07236 462 aa2.41□□□□□ -2.02
CSF1YLR087C TIF1P10081 395 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C POT1P27796 417 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
CSF1YLR087C YAP5P40574 245 aa2.41□□□□□ -2.02
CSF1YLR087C SSN8P47821 323 aa2.41□□□□□ -2.02
CSF1YLR087C HCH1P53834 153 aa2.41□□□□□ -2.02
CSF1YLR087C ALG11P53954 548 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C EMC1P25574 760 aa2.41□□□□□ -2.02
CSF1YLR087C ANP1P32629 500 aa2.41□□□□□ -2.02
CSF1YLR087C YNG2P38806 282 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C CCT7P42943 550 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C GYP7P48365 746 aa2.41□□□□□ -2.02
CSF1YLR087C MNN10P50108 393 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C SPC105P53148 917 aa2.41□□□□□ -2.02
CSF1YLR087C HEF3P53978 1044 aaKnown RBP2.41□□□□□ -2.02
CSF1YLR087C SKY1Q03656 742 aa2.41□□□□□ -2.02
CSF1YLR087C PEX19Q07418 342 aa2.41□□□□□ -2.02
CSF1YLR087C YOL036WQ08206 761 aa2.41□□□□□ -2.02
CSF1YLR087C RNA14P25298 677 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C PRP45P28004 379 aaPredicted RBP2.4□□□□□ -2.02
CSF1YLR087C ITR1P30605 584 aa2.4□□□□□ -2.02
CSF1YLR087C UTP11P34247 250 aaPredicted RBP2.4□□□□□ -2.02
CSF1YLR087C PCH2P38126 564 aa2.4□□□□□ -2.02
CSF1YLR087C SEA4P38164 1038 aa2.4□□□□□ -2.02
CSF1YLR087C OPY1P38271 328 aa2.4□□□□□ -2.02
CSF1YLR087C FCY21P40039 528 aa2.4□□□□□ -2.02
CSF1YLR087C YGR016WP53209 190 aa2.4□□□□□ -2.02
CSF1YLR087C PBP1P53297 722 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C HEL2Q05580 639 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C NCB2Q92317 146 aa2.4□□□□□ -2.02
CSF1YLR087C PDR1P12383 1068 aa2.4□□□□□ -2.02
CSF1YLR087C GLK1P17709 500 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C MUD2P36084 527 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C BAP2P38084 609 aa2.4□□□□□ -2.02
CSF1YLR087C RSP5P39940 809 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C MXR1P40029 184 aa2.4□□□□□ -2.02
CSF1YLR087C MAM33P40513 266 aa2.4□□□□□ -2.02
CSF1YLR087C YPT32P51996 222 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C ATG1P53104 897 aa2.4□□□□□ -2.02
CSF1YLR087C YML082WQ04533 649 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C COG4Q06096 861 aa2.4□□□□□ -2.02
CSF1YLR087C DSE3Q08729 430 aa2.4□□□□□ -2.02
CSF1YLR087C NEW1Q08972 1196 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C YPR063CQ12160 140 aa2.4□□□□□ -2.02
CSF1YLR087C DBP10Q12389 995 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C PFK27Q12471 397 aaPredicted RBP2.4□□□□□ -2.02
CSF1YLR087C YML002WP0CF17 737 aa2.4□□□□□ -2.02
CSF1YLR087C PWP2P25635 923 aaKnown RBP2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms