RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C AXL1P40851 1208 aa6.08□□□□□ -1.44
SSK1YLR006C TOS3P43637 560 aa6.08□□□□□ -1.44
SSK1YLR006C YJR079WP47126 109 aa6.08□□□□□ -1.44
SSK1YLR006C YGR125WP53273 1036 aa6.08□□□□□ -1.44
SSK1YLR006C NSG2P53898 299 aa6.08□□□□□ -1.44
SSK1YLR006C UGO1Q03327 502 aa6.08□□□□□ -1.44
SSK1YLR006C GAD1Q04792 585 aa6.08□□□□□ -1.44
SSK1YLR006C MCP2Q06567 569 aa6.08□□□□□ -1.44
SSK1YLR006C MLC2Q06580 163 aa6.08□□□□□ -1.44
SSK1YLR006C GYP1Q08484 637 aa6.08□□□□□ -1.44
SSK1YLR006C HSH49Q99181 213 aaPredicted RBP6.08□□□□□ -1.44
SSK1YLR006C STF1P01098 86 aa6.07□□□□□ -1.44
SSK1YLR006C SNF3P10870 884 aa6.07□□□□□ -1.44
SSK1YLR006C RSC6P25632 483 aa6.07□□□□□ -1.44
SSK1YLR006C NAM7P30771 971 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C PSY2P40164 858 aa6.07□□□□□ -1.44
SSK1YLR006C SDS3P40505 327 aa6.07□□□□□ -1.44
SSK1YLR006C PKP1P40530 394 aa6.07□□□□□ -1.44
SSK1YLR006C NAS2P40555 220 aa6.07□□□□□ -1.44
SSK1YLR006C PXA1P41909 870 aa6.07□□□□□ -1.44
SSK1YLR006C GSM1P42950 618 aa6.07□□□□□ -1.44
SSK1YLR006C CCT8P47079 568 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C SHE4P51534 789 aa6.07□□□□□ -1.44
SSK1YLR006C ACS2P52910 683 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C TIM10P87108 93 aa6.07□□□□□ -1.44
SSK1YLR006C URH1Q04179 340 aa6.07□□□□□ -1.44
SSK1YLR006C YPR097WQ06839 1073 aa6.07□□□□□ -1.44
SSK1YLR006C YDL073WQ07454 984 aa6.07□□□□□ -1.44
SSK1YLR006C NOP6Q07623 225 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C KEL3Q08979 651 aaPredicted RBP6.07□□□□□ -1.44
SSK1YLR006C YRM1Q12340 786 aa6.07□□□□□ -1.44
SSK1YLR006C MMP1Q12372 583 aa6.07□□□□□ -1.44
SSK1YLR006C BRR1Q99177 341 aaPredicted RBP6.07□□□□□ -1.44
SSK1YLR006C RGR1P19263 1082 aa6.07□□□□□ -1.44
SSK1YLR006C BET3P36149 193 aa6.07□□□□□ -1.44
SSK1YLR006C PPS1P38148 807 aa6.07□□□□□ -1.44
SSK1YLR006C PIC2P40035 300 aa6.07□□□□□ -1.44
SSK1YLR006C SBE2P42223 864 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C PFD1P46988 109 aa6.07□□□□□ -1.44
SSK1YLR006C TAN1P53072 289 aaPredicted RBP6.07□□□□□ -1.44
SSK1YLR006C EFM5P53200 248 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C PBP1P53297 722 aaKnown RBP6.07□□□□□ -1.44
SSK1YLR006C RET3P53600 189 aa6.07□□□□□ -1.44
SSK1YLR006C YNR063WP53749 607 aa6.07□□□□□ -1.44
SSK1YLR006C SNP1Q00916 300 aaPredicted RBP6.07□□□□□ -1.44
SSK1YLR006C ATG26Q06321 1198 aa6.07□□□□□ -1.44
SSK1YLR006C FAP7Q12055 197 aaPredicted RBP6.07□□□□□ -1.44
SSK1YLR006C AAC3P18238 307 aa6.06□□□□□ -1.44
SSK1YLR006C SRP54P20424 541 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C GSY1P23337 708 aa6.06□□□□□ -1.44
SSK1YLR006C SEC21P32074 935 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C MCD4P36051 919 aa6.06□□□□□ -1.44
SSK1YLR006C RDH54P38086 958 aa6.06□□□□□ -1.44
SSK1YLR006C UBS1P38290 277 aa6.06□□□□□ -1.44
SSK1YLR006C YBR184WP38299 523 aa6.06□□□□□ -1.44
SSK1YLR006C SRP72P38688 640 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C DED81P38707 554 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C TOM71P38825 639 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C FAA3P39002 694 aa6.06□□□□□ -1.44
SSK1YLR006C SEC26P41810 973 aaKnown RBP6.06□□□□□ -1.44
SSK1YLR006C SAM37P50110 327 aa6.06□□□□□ -1.44
SSK1YLR006C ASE1P50275 885 aa6.06□□□□□ -1.44
SSK1YLR006C CBK1P53894 756 aa6.06□□□□□ -1.44
SSK1YLR006C GTR1Q00582 310 aa6.06□□□□□ -1.44
SSK1YLR006C YMR111CQ04461 462 aaPredicted RBP6.06□□□□□ -1.44
SSK1YLR006C CSM3Q04659 317 aa6.06□□□□□ -1.44
SSK1YLR006C DSE3Q08729 430 aa6.06□□□□□ -1.44
SSK1YLR006C YRR1Q12172 810 aa6.06□□□□□ -1.44
SSK1YLR006C FKS1P38631 1876 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C GSC2P40989 1895 aa6.05□□□□□ -1.44
SSK1YLR006C POT1P27796 417 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SSK1YLR006C NPL6P32832 435 aa6.05□□□□□ -1.44
SSK1YLR006C SMC1P32908 1225 aa6.05□□□□□ -1.44
SSK1YLR006C PCS60P38137 543 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SSK1YLR006C OLA1P38219 394 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C RIM4P38741 713 aa6.05□□□□□ -1.44
SSK1YLR006C HIS6P40545 261 aa6.05□□□□□ -1.44
SSK1YLR006C APL6P46682 809 aa6.05□□□□□ -1.44
SSK1YLR006C TRS85P46944 698 aa6.05□□□□□ -1.44
SSK1YLR006C MAD3P47074 515 aa6.05□□□□□ -1.44
SSK1YLR006C TAD1P53065 400 aa6.05□□□□□ -1.44
SSK1YLR006C UTP22P53254 1237 aaPredicted RBP6.05□□□□□ -1.44
SSK1YLR006C AIM33Q04516 312 aa6.05□□□□□ -1.44
SSK1YLR006C GSF2Q04697 403 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C STE23Q06010 1027 aa6.05□□□□□ -1.44
SSK1YLR006C PUN1Q06991 263 aa6.05□□□□□ -1.44
SSK1YLR006C YOR389WQ08912 624 aa6.05□□□□□ -1.44
SSK1YLR006C PSF3Q12146 194 aa6.05□□□□□ -1.44
SSK1YLR006C LEU1P07264 779 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C NUC1P08466 329 aa6.05□□□□□ -1.44
SSK1YLR006C TUP1P16649 713 aa6.05□□□□□ -1.44
SSK1YLR006C PRE10P21242 288 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SSK1YLR006C DAL7P21826 554 aa6.05□□□□□ -1.44
SSK1YLR006C RET1P22276 1149 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C SUV3P32580 737 aa6.05□□□□□ -1.44
SSK1YLR006C UBP13P38187 747 aa6.05□□□□□ -1.44
SSK1YLR006C SET5P38890 526 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C ALD5P40047 520 aaKnown RBP6.05□□□□□ -1.44
SSK1YLR006C LTP1P40347 161 aa6.05□□□□□ -1.44
SSK1YLR006C YIL161WP40449 235 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms