RNA–Protein interactions for RNA: YKL188C

PXA2, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeastyeast

Gene PXA2, Length 2,562 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXA2YKL188C BDH2P39713 417 aa2.35□□□□□ -2.03
PXA2YKL188C CCT5P40413 562 aaKnown RBP2.35□□□□□ -2.03
PXA2YKL188C YLR407WQ06070 228 aa2.35□□□□□ -2.03
PXA2YKL188C USV1Q12132 391 aa2.35□□□□□ -2.03
PXA2YKL188C YKU70P32807 602 aa2.34□□□□□ -2.03
PXA2YKL188C YIL077CP40508 320 aa2.34□□□□□ -2.03
PXA2YKL188C PXA1P41909 870 aa2.34□□□□□ -2.03
PXA2YKL188C MNN11P46985 422 aaKnown RBP2.34□□□□□ -2.03
PXA2YKL188C SPO1P53541 631 aa2.34□□□□□ -2.03
PXA2YKL188C VPS36Q06696 566 aa2.34□□□□□ -2.03
PXA2YKL188C RPS17AP02407 136 aaKnown RBP2.34□□□□□ -2.04
PXA2YKL188C RPS17BP14127 136 aaKnown RBP2.34□□□□□ -2.04
PXA2YKL188C THR1P17423 357 aaKnown RBP2.34□□□□□ -2.04
PXA2YKL188C FEN2P25621 512 aaKnown RBP2.34□□□□□ -2.04
PXA2YKL188C OAF1P39720 1047 aaPredicted RBP2.34□□□□□ -2.04
PXA2YKL188C BIT61P47041 543 aa2.34□□□□□ -2.04
PXA2YKL188C KCC4P25389 1037 aa2.33□□□□□ -2.04
PXA2YKL188C COS111P38308 924 aa2.33□□□□□ -2.04
PXA2YKL188C TDP1P38319 544 aa2.33□□□□□ -2.04
PXA2YKL188C YIL166CP40445 542 aa2.33□□□□□ -2.04
PXA2YKL188C ENP2P48234 707 aaKnown RBP2.33□□□□□ -2.04
PXA2YKL188C YSH1Q06224 779 aaPredicted RBP2.33□□□□□ -2.04
PXA2YKL188C YDL086WQ07505 273 aa2.33□□□□□ -2.04
PXA2YKL188C MLH3Q12083 715 aa2.33□□□□□ -2.04
PXA2YKL188C OAF3P36023 863 aa2.33□□□□□ -2.04
PXA2YKL188C MPS3P47069 682 aa2.33□□□□□ -2.04
PXA2YKL188C RFX1P48743 811 aa2.33□□□□□ -2.04
PXA2YKL188C VPS73P53142 486 aaKnown RBP2.33□□□□□ -2.04
PXA2YKL188C YGR151CP53287 111 aa2.33□□□□□ -2.04
PXA2YKL188C NOP15P53927 220 aaPredicted RBP2.33□□□□□ -2.04
PXA2YKL188C ECM9Q02202 377 aa2.33□□□□□ -2.04
PXA2YKL188C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
PXA2YKL188C TAF3Q12297 353 aa2.33□□□□□ -2.04
PXA2YKL188C RPS21BQ3E754 87 aaKnown RBP2.33□□□□□ -2.04
PXA2YKL188C APM4Q99186 491 aa2.33□□□□□ -2.04
PXA2YKL188C SPO11P23179 398 aa2.32□□□□□ -2.04
PXA2YKL188C FUB1P25659 250 aa2.32□□□□□ -2.04
PXA2YKL188C SEC6P32844 805 aa2.32□□□□□ -2.04
PXA2YKL188C GMH1P36125 273 aa2.32□□□□□ -2.04
PXA2YKL188C APL3P38065 1025 aa2.32□□□□□ -2.04
PXA2YKL188C CTP1P38152 299 aa2.32□□□□□ -2.04
PXA2YKL188C GPP1P41277 250 aaKnown RBP2.32□□□□□ -2.04
PXA2YKL188C APM1Q00776 475 aaPredicted RBP2.32□□□□□ -2.04
PXA2YKL188C NSE5Q03718 556 aa2.32□□□□□ -2.04
PXA2YKL188C YFT2Q06676 274 aa2.32□□□□□ -2.04
PXA2YKL188C BMS1Q08965 1183 aaKnown RBP2.32□□□□□ -2.04
PXA2YKL188C HFI1Q12060 488 aa2.32□□□□□ -2.04
PXA2YKL188C RPN13O13563 156 aa2.32□□□□□ -2.04
PXA2YKL188C UBP12P39538 1254 aa2.32□□□□□ -2.04
PXA2YKL188C CCT7P42943 550 aaKnown RBP2.32□□□□□ -2.04
PXA2YKL188C TAH11P47112 604 aa2.32□□□□□ -2.04
PXA2YKL188C RNR4P49723 345 aaKnown RBP2.32□□□□□ -2.04
PXA2YKL188C TAF4P50105 388 aa2.32□□□□□ -2.04
PXA2YKL188C GPG1P53130 126 aa2.32□□□□□ -2.04
PXA2YKL188C ILV6P25605 309 aaKnown RBP2.31□□□□□ -2.04
PXA2YKL188C PPZ2P33329 710 aa2.31□□□□□ -2.04
PXA2YKL188C HXT6P39003 570 aaKnown RBP2.31□□□□□ -2.04
PXA2YKL188C HXT7P39004 570 aa2.31□□□□□ -2.04
PXA2YKL188C YEN1P40028 759 aa2.31□□□□□ -2.04
PXA2YKL188C RGC1Q06108 1083 aaKnown RBP2.31□□□□□ -2.04
PXA2YKL188C YPS7Q06325 596 aa2.31□□□□□ -2.04
PXA2YKL188C RMP1Q12530 201 aa2.31□□□□□ -2.04
PXA2YKL188C YPT7P32939 208 aa2.31□□□□□ -2.04
PXA2YKL188C SET3P36124 751 aa2.31□□□□□ -2.04
PXA2YKL188C KSP1P38691 1029 aaKnown RBP2.31□□□□□ -2.04
PXA2YKL188C BUD8P41698 603 aa2.31□□□□□ -2.04
PXA2YKL188C SPC98P53540 846 aa2.31□□□□□ -2.04
PXA2YKL188C RCR2Q03446 210 aaKnown RBP2.31□□□□□ -2.04
PXA2YKL188C STP4Q07351 490 aa2.31□□□□□ -2.04
PXA2YKL188C TRE2Q08693 809 aa2.31□□□□□ -2.04
PXA2YKL188C AIM41Q12032 185 aa2.31□□□□□ -2.04
PXA2YKL188C IME1P21190 360 aa2.3□□□□□ -2.04
PXA2YKL188C DGR2P32330 852 aa2.3□□□□□ -2.04
PXA2YKL188C MUP3P38734 546 aa2.3□□□□□ -2.04
PXA2YKL188C ATF1P40353 525 aa2.3□□□□□ -2.04
PXA2YKL188C VID28P40547 921 aa2.3□□□□□ -2.04
PXA2YKL188C IES1P43579 692 aa2.3□□□□□ -2.04
PXA2YKL188C DUG1P43616 481 aaKnown RBP2.3□□□□□ -2.04
PXA2YKL188C FDC1Q03034 503 aa2.3□□□□□ -2.04
PXA2YKL188C UFO1Q04511 668 aa2.3□□□□□ -2.04
PXA2YKL188C YPR027CQ12079 277 aa2.3□□□□□ -2.04
PXA2YKL188C RKI1Q12189 258 aa2.3□□□□□ -2.04
PXA2YKL188C GLN4P13188 809 aaKnown RBP2.3□□□□□ -2.04
PXA2YKL188C AEP2P22136 580 aa2.3□□□□□ -2.04
PXA2YKL188C YHR033WP38690 423 aa2.3□□□□□ -2.04
PXA2YKL188C KHA1P40309 873 aa2.3□□□□□ -2.04
PXA2YKL188C DAK1P54838 584 aaKnown RBP2.3□□□□□ -2.04
PXA2YKL188C CEF1Q03654 590 aaPredicted RBP2.3□□□□□ -2.04
PXA2YKL188C SKY1Q03656 742 aa2.3□□□□□ -2.04
PXA2YKL188C GIS1Q03833 894 aa2.3□□□□□ -2.04
PXA2YKL188C HLR1Q04429 423 aa2.3□□□□□ -2.04
PXA2YKL188C TUB1P09733 447 aaKnown RBP2.29□□□□□ -2.04
PXA2YKL188C RPS21AP0C0V8 87 aaKnown RBP2.29□□□□□ -2.04
PXA2YKL188C ACO1P19414 778 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PXA2YKL188C TSR4P25040 408 aa2.29□□□□□ -2.04
PXA2YKL188C YHR097CP38809 366 aaKnown RBP2.29□□□□□ -2.04
PXA2YKL188C YEL020CP39994 560 aa2.29□□□□□ -2.04
PXA2YKL188C THI6P41835 540 aa2.29□□□□□ -2.04
PXA2YKL188C PMT6P42934 759 aa2.29□□□□□ -2.04
PXA2YKL188C ATG36P46983 293 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 63 ms