RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W MRP8P35719 219 aa4.89□□□□□ -1.63
ABF1YKL112W UBP11P36026 717 aa4.89□□□□□ -1.63
ABF1YKL112W PBY1P38254 753 aa4.89□□□□□ -1.63
ABF1YKL112W ATG3P40344 310 aa4.89□□□□□ -1.63
ABF1YKL112W YIL161WP40449 235 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W PHB1P40961 287 aa4.89□□□□□ -1.63
ABF1YKL112W YFH7P43591 353 aa4.89□□□□□ -1.63
ABF1YKL112W ABM1P47146 123 aa4.89□□□□□ -1.63
ABF1YKL112W YGR237CP50089 785 aa4.89□□□□□ -1.63
ABF1YKL112W YNL193WP53870 558 aa4.89□□□□□ -1.63
ABF1YKL112W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
ABF1YKL112W ENA2Q01896 1091 aa4.89□□□□□ -1.63
ABF1YKL112W PDS5Q04264 1277 aa4.89□□□□□ -1.63
ABF1YKL112W TSR1Q07381 788 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W YDL124WQ07551 312 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W ENA5Q12691 1091 aa4.89□□□□□ -1.63
ABF1YKL112W TRK1P12685 1235 aa4.89□□□□□ -1.63
ABF1YKL112W SRS2P12954 1174 aa4.89□□□□□ -1.63
ABF1YKL112W PRP28P23394 588 aa4.89□□□□□ -1.63
ABF1YKL112W DBP1P24784 617 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W CLB1P24868 471 aa4.89□□□□□ -1.63
ABF1YKL112W COQ8P27697 501 aa4.89□□□□□ -1.63
ABF1YKL112W DBF20P32328 564 aa4.89□□□□□ -1.63
ABF1YKL112W SFP1P32432 683 aa4.89□□□□□ -1.63
ABF1YKL112W NIP1P32497 812 aaKnown RBP4.89□□□□□ -1.63
ABF1YKL112W BCS1P32839 456 aa4.89□□□□□ -1.63
ABF1YKL112W TFC4P33339 1025 aa4.89□□□□□ -1.63
ABF1YKL112W PXL1P36166 706 aa4.89□□□□□ -1.63
ABF1YKL112W SMF2P38778 549 aa4.89□□□□□ -1.63
ABF1YKL112W LOC1P43586 204 aaPredicted RBP4.89□□□□□ -1.63
ABF1YKL112W APS3P47064 194 aa4.89□□□□□ -1.63
ABF1YKL112W SPR28Q04921 423 aa4.89□□□□□ -1.63
ABF1YKL112W NUT2Q06213 157 aa4.89□□□□□ -1.63
ABF1YKL112W TLG2Q08144 397 aa4.89□□□□□ -1.63
ABF1YKL112W APL4Q12028 832 aa4.89□□□□□ -1.63
ABF1YKL112W NOT5Q12514 560 aaPredicted RBP4.89□□□□□ -1.63
ABF1YKL112W FUR1P18562 216 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W SFL1P20134 766 aa4.88□□□□□ -1.63
ABF1YKL112W NPR1P22211 790 aa4.88□□□□□ -1.63
ABF1YKL112W MSH1P25846 959 aa4.88□□□□□ -1.63
ABF1YKL112W GUT2P32191 649 aa4.88□□□□□ -1.63
ABF1YKL112W IRE1P32361 1115 aa4.88□□□□□ -1.63
ABF1YKL112W PEP7P32609 515 aa4.88□□□□□ -1.63
ABF1YKL112W DUR3P33413 735 aa4.88□□□□□ -1.63
ABF1YKL112W STE13P33894 931 aa4.88□□□□□ -1.63
ABF1YKL112W PTC3P34221 468 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W POL12P38121 705 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W RFC1P38630 861 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W RLP7P40693 322 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W ECL1P48235 211 aa4.88□□□□□ -1.63
ABF1YKL112W RPN14P53196 417 aa4.88□□□□□ -1.63
ABF1YKL112W YNR063WP53749 607 aa4.88□□□□□ -1.63
ABF1YKL112W CWC24P53769 259 aa4.88□□□□□ -1.63
ABF1YKL112W DPB4Q04603 196 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W IVY1Q04934 453 aa4.88□□□□□ -1.63
ABF1YKL112W YDR306CQ06640 478 aa4.88□□□□□ -1.63
ABF1YKL112W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
ABF1YKL112W ACF2Q12168 779 aa4.88□□□□□ -1.63
ABF1YKL112W HSH49Q99181 213 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W CET1O13297 549 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W ENO2P00925 437 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W FUS1P11710 512 aa4.88□□□□□ -1.63
ABF1YKL112W RGT1P32862 1170 aa4.88□□□□□ -1.63
ABF1YKL112W PET112P33893 541 aa4.88□□□□□ -1.63
ABF1YKL112W VPS35P34110 944 aa4.88□□□□□ -1.63
ABF1YKL112W RRP1P35178 278 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W RTC3P38804 111 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W AGE2P40529 298 aa4.88□□□□□ -1.63
ABF1YKL112W MKT1P40850 830 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W YFL066CP43538 392 aa4.88□□□□□ -1.63
ABF1YKL112W STU2P46675 888 aa4.88□□□□□ -1.63
ABF1YKL112W CCT8P47079 568 aaKnown RBP4.88□□□□□ -1.63
ABF1YKL112W ENT3P47160 408 aa4.88□□□□□ -1.63
ABF1YKL112W CAF130P53280 1122 aaPredicted RBP4.88□□□□□ -1.63
ABF1YKL112W VPS60Q03390 229 aa4.88□□□□□ -1.63
ABF1YKL112W YLR287CQ05881 355 aa4.88□□□□□ -1.63
ABF1YKL112W ESC2Q06340 456 aa4.88□□□□□ -1.63
ABF1YKL112W MIP1P15801 1254 aa4.87□□□□□ -1.63
ABF1YKL112W HMX1P32339 317 aa4.87□□□□□ -1.63
ABF1YKL112W VPH2P32341 215 aa4.87□□□□□ -1.63
ABF1YKL112W CBF2P32504 956 aa4.87□□□□□ -1.63
ABF1YKL112W UBC6P33296 250 aaPredicted RBP4.87□□□□□ -1.63
ABF1YKL112W VPS45P38932 577 aa4.87□□□□□ -1.63
ABF1YKL112W MBP1P39678 833 aa4.87□□□□□ -1.63
ABF1YKL112W NOP16P40007 231 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W YJR098CP47139 656 aa4.87□□□□□ -1.63
ABF1YKL112W TOM22P49334 152 aa4.87□□□□□ -1.63
ABF1YKL112W MCM6P53091 1017 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W ALO1P54783 526 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W RTN1Q04947 295 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W ABP140Q08641 628 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W RRP6Q12149 733 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W SRN2Q99176 213 aa4.87□□□□□ -1.63
ABF1YKL112W ERR1P0CX10 437 aa4.87□□□□□ -1.63
ABF1YKL112W ERR2P0CX11 437 aa4.87□□□□□ -1.63
ABF1YKL112W SNF3P10870 884 aa4.87□□□□□ -1.63
ABF1YKL112W YAP1P19880 650 aaKnown RBP4.87□□□□□ -1.63
ABF1YKL112W YBR071WP38243 211 aa4.87□□□□□ -1.63
ABF1YKL112W UBS1P38290 277 aa4.87□□□□□ -1.63
ABF1YKL112W COS111P38308 924 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms