RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	BTT1	P40314	149 aa	Predicted RBP	13.55	□□□□□ -0.24
HOM6	YJR139C	PSP1	P50896	841 aa	Known RBP	13.55	□□□□□ -0.24
HOM6	YJR139C	PML39	Q03760	334 aa		13.55	□□□□□ -0.24
HOM6	YJR139C	ECM22	Q05958	814 aa	Predicted RBP	13.55	□□□□□ -0.24
HOM6	YJR139C	NDJ1	Q12366	352 aa		13.55	□□□□□ -0.24
HOM6	YJR139C	EMP46	Q12396	444 aa		13.55	□□□□□ -0.24
HOM6	YJR139C	IMG2	P25642	146 aa	Predicted RBP	13.54	□□□□□ -0.24
HOM6	YJR139C	COY1	P34237	679 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	STU2	P46675	888 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	VTC4	P47075	721 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	YNR014W	P53719	212 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	LEE1	Q02799	301 aa	Known RBP	13.54	□□□□□ -0.24
HOM6	YJR139C	YDR222W	Q04925	415 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	YOR059C	Q08448	450 aa	Known RBP	13.54	□□□□□ -0.24
HOM6	YJR139C	YPQ1	Q12010	308 aa		13.54	□□□□□ -0.24
HOM6	YJR139C	BI2	P03873	423 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	BI4	P03879	638 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	MTF2	P10849	440 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	KAR3	P17119	729 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	RAM1	P22007	431 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	DAL1	P32375	460 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	DSS4	P32601	143 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	DUG2	P38149	878 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	TDA3	P38758	523 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	YMR124W	P39523	943 aa	Known RBP	13.53	□□□□□ -0.24
HOM6	YJR139C	YDR344C	Q05510	147 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	HRD3	Q05787	833 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	BI3	Q9ZZW7	517 aa		13.53	□□□□□ -0.24
HOM6	YJR139C	BCH2	P36122	765 aa		13.52	□□□□□ -0.25
HOM6	YJR139C	YBR225W	P38321	900 aa		13.52	□□□□□ -0.25
HOM6	YJR139C	LSB6	P42951	607 aa		13.52	□□□□□ -0.25
HOM6	YJR139C	YGR111W	P53265	400 aa		13.52	□□□□□ -0.25
HOM6	YJR139C	UTP5	Q04177	643 aa	Known RBP	13.52	□□□□□ -0.25
HOM6	YJR139C	TAF9	Q05027	157 aa		13.52	□□□□□ -0.25
HOM6	YJR139C	AEP2	P22136	580 aa		13.51	□□□□□ -0.25
HOM6	YJR139C	YKL097C	P34245	136 aa		13.51	□□□□□ -0.25
HOM6	YJR139C	YPL062W	Q02781	134 aa		13.51	□□□□□ -0.25
HOM6	YJR139C	BSP1	Q06604	576 aa		13.51	□□□□□ -0.25
HOM6	YJR139C	APC5	Q08683	685 aa		13.51	□□□□□ -0.25
HOM6	YJR139C	MTF1	P14908	341 aa	Known RBP	13.5	□□□□□ -0.25
HOM6	YJR139C	NUP60	P39705	539 aa		13.5	□□□□□ -0.25
HOM6	YJR139C	OSW7	P43611	510 aa		13.5	□□□□□ -0.25
HOM6	YJR139C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	13.5	□□□□□ -0.25	not detected
HOM6	YJR139C	GYL1	Q04322	720 aa		13.5	□□□□□ -0.25
HOM6	YJR139C	VPS38	Q05919	439 aa		13.5	□□□□□ -0.25
HOM6	YJR139C	YCG1	Q06680	1035 aa		13.5	□□□□□ -0.25
HOM6	YJR139C	RGR1	P19263	1082 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	ISF1	P32488	338 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	SRB2	P34162	210 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	PCH2	P38126	564 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	NCL1	P38205	684 aa	Known RBP	13.49	□□□□□ -0.25
HOM6	YJR139C	YBR053C	P38235	358 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	SET5	P38890	526 aa	Known RBP	13.49	□□□□□ -0.25
HOM6	YJR139C	SNZ3	P43545	298 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	YGR021W	P53212	290 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	SNZ2	P53824	298 aa		13.49	□□□□□ -0.25
HOM6	YJR139C	SPG3	Q04398	127 aa	Predicted RBP	13.49	□□□□□ -0.25
HOM6	YJR139C	PUP3	P25451	205 aa	Known RBP	13.48	□□□□□ -0.25
HOM6	YJR139C	SEC1	P30619	724 aa	Known RBP	13.48	□□□□□ -0.25
HOM6	YJR139C	SSP1	P38871	571 aa		13.48	□□□□□ -0.25
HOM6	YJR139C	SYH1	Q02875	849 aa	Known RBP	13.48	□□□□□ -0.25
HOM6	YJR139C	AIM39	Q08223	395 aa		13.48	□□□□□ -0.25
HOM6	YJR139C	PUT4	P15380	627 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	EST1	P17214	699 aa	Predicted RBP	13.47	□□□□□ -0.25
HOM6	YJR139C	STE11	P23561	717 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	PPH22	P23595	377 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	SPC110	P32380	944 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	EBP2	P36049	427 aa	Known RBP	13.47	□□□□□ -0.25
HOM6	YJR139C	DSF2	P38213	736 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	HSL7	P38274	827 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	YER189W	P40104	122 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	PSY2	P40164	858 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	PRK1	P40494	810 aa		13.47	□□□□□ -0.25
HOM6	YJR139C	SIR1	P21691	654 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	YMR018W	Q04364	514 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	YLR001C	Q07895	862 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	SIL1	Q08199	421 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	THI20	Q08224	551 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	YRR1	Q12172	810 aa		13.46	□□□□□ -0.25
HOM6	YJR139C	CYC8	P14922	966 aa		13.45	□□□□□ -0.26
HOM6	YJR139C	RAD57	P25301	460 aa		13.45	□□□□□ -0.26
HOM6	YJR139C	SGF29	P25554	259 aa		13.45	□□□□□ -0.26
HOM6	YJR139C	TMN3	P40071	706 aa		13.45	□□□□□ -0.26
HOM6	YJR139C	ELP3	Q02908	557 aa	Known RBP	13.45	□□□□□ -0.26
HOM6	YJR139C	SOV1	Q04748	898 aa		13.45	□□□□□ -0.26
HOM6	YJR139C	LPX1	Q12405	387 aa	Known RBP	13.45	□□□□□ -0.26
HOM6	YJR139C	HSP78	P33416	811 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	SEG2	P34250	1132 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	POL12	P38121	705 aa	Predicted RBP	13.44	□□□□□ -0.26
HOM6	YJR139C	YIL161W	P40449	235 aa	Known RBP	13.44	□□□□□ -0.26
HOM6	YJR139C	JJJ1	P53863	590 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	YHM2	Q04013	314 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	TMN2	Q04562	672 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	IRC10	Q08118	586 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	DAS2	Q12084	232 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	ARP7	Q12406	477 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	VPS5	Q92331	675 aa		13.44	□□□□□ -0.26
HOM6	YJR139C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	13.43	□□□□□ -0.26	not detected
HOM6	YJR139C	ERG11	P10614	530 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	ABD1	P32783	436 aa	Predicted RBP	13.43	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms