RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W YIL077CP40508 320 aa3.37□□□□□ -1.87
HIT1YJR055W PMT6P42934 759 aa3.37□□□□□ -1.87
HIT1YJR055W MDM20Q12387 796 aaKnown RBP3.37□□□□□ -1.87
HIT1YJR055W YUR1P26725 428 aa3.36□□□□□ -1.87
HIT1YJR055W TIM23P32897 222 aa3.36□□□□□ -1.87
HIT1YJR055W SSZ1P38788 538 aaKnown RBP3.36□□□□□ -1.87
HIT1YJR055W SNF12P53628 566 aa3.36□□□□□ -1.87
HIT1YJR055W MPS1P54199 764 aa3.36□□□□□ -1.87
HIT1YJR055W YDR179W-AQ03983 463 aa3.36□□□□□ -1.87
HIT1YJR055W YFT2Q06676 274 aa3.36□□□□□ -1.87
HIT1YJR055W VPS36Q06696 566 aa3.36□□□□□ -1.87
HIT1YJR055W ISA1Q07821 250 aaPredicted RBP3.36□□□□□ -1.87
HIT1YJR055W POM34Q12445 299 aa3.36□□□□□ -1.87
HIT1YJR055W YOR131CQ12486 218 aa3.36□□□□□ -1.87
HIT1YJR055W YPT7P32939 208 aa3.35□□□□□ -1.87
HIT1YJR055W HOT13P36078 116 aa3.35□□□□□ -1.87
HIT1YJR055W AKL1P38080 1108 aaKnown RBP3.35□□□□□ -1.87
HIT1YJR055W BPL1P48445 690 aaPredicted RBP3.35□□□□□ -1.87
HIT1YJR055W DIP5P53388 608 aa3.35□□□□□ -1.87
HIT1YJR055W ARG7Q04728 441 aa3.35□□□□□ -1.87
HIT1YJR055W CIR2Q08822 631 aa3.35□□□□□ -1.87
HIT1YJR055W NTH1P32356 751 aa3.34□□□□□ -1.87
HIT1YJR055W COS111P38308 924 aa3.34□□□□□ -1.87
HIT1YJR055W DOT6P40059 670 aaKnown RBP3.34□□□□□ -1.87
HIT1YJR055W YJR039WP47107 1121 aa3.34□□□□□ -1.87
HIT1YJR055W NNF1P47149 201 aa3.34□□□□□ -1.87
HIT1YJR055W UFO1Q04511 668 aa3.34□□□□□ -1.87
HIT1YJR055W ATG33Q06485 197 aa3.34□□□□□ -1.87
HIT1YJR055W ERG20P08524 352 aaKnown RBP3.33□□□□□ -1.88
HIT1YJR055W HMG1P12683 1054 aa3.33□□□□□ -1.88
HIT1YJR055W YEL1P34225 687 aa3.33□□□□□ -1.88
HIT1YJR055W YHR202WP38887 602 aa3.33□□□□□ -1.88
HIT1YJR055W ULP2P40537 1034 aaPredicted RBP3.33□□□□□ -1.88
HIT1YJR055W PIP2P52960 996 aa3.33□□□□□ -1.88
HIT1YJR055W AIM14P53109 570 aa3.33□□□□□ -1.88
HIT1YJR055W YGL117WP53133 265 aa3.33□□□□□ -1.88
HIT1YJR055W NGL2Q03264 515 aaKnown RBP3.33□□□□□ -1.88
HIT1YJR055W RPN4Q03465 531 aa3.33□□□□□ -1.88
HIT1YJR055W IZH3Q07959 543 aa3.33□□□□□ -1.88
HIT1YJR055W DCS2Q12123 353 aa3.33□□□□□ -1.88
HIT1YJR055W YOL098CQ12496 1037 aa3.33□□□□□ -1.88
HIT1YJR055W AI5_ALPHAQ9ZZX1 630 aa3.33□□□□□ -1.88
HIT1YJR055W AAD3P25612 363 aa3.32□□□□□ -1.88
HIT1YJR055W PCL2P25693 308 aa3.32□□□□□ -1.88
HIT1YJR055W ELF1P36053 145 aa3.32□□□□□ -1.88
HIT1YJR055W PBP2P38151 413 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
HIT1YJR055W NUG1P40010 520 aaKnown RBP3.32□□□□□ -1.88
HIT1YJR055W BIT61P47041 543 aa3.32□□□□□ -1.88
HIT1YJR055W STP1Q00947 519 aa3.32□□□□□ -1.88
HIT1YJR055W LEU2P04173 364 aaPredicted RBP3.31□□□□□ -1.88
HIT1YJR055W STE4P18851 423 aa3.31□□□□□ -1.88
HIT1YJR055W MSH2P25847 964 aa3.31□□□□□ -1.88
HIT1YJR055W SRP40P32583 406 aaPredicted RBP3.31□□□□□ -1.88
HIT1YJR055W BUD6P41697 788 aa3.31□□□□□ -1.88
HIT1YJR055W CPR8P53728 308 aa3.31□□□□□ -1.88
HIT1YJR055W GPD1Q00055 391 aaKnown RBP3.31□□□□□ -1.88
HIT1YJR055W TDA9Q04545 1251 aa3.31□□□□□ -1.88
HIT1YJR055W COG8Q04632 607 aa3.31□□□□□ -1.88
HIT1YJR055W VHS3Q08438 674 aa3.31□□□□□ -1.88
HIT1YJR055W GEP3Q08622 556 aa3.31□□□□□ -1.88
HIT1YJR055W FRS1P15624 595 aaKnown RBP3.3□□□□□ -1.88
HIT1YJR055W SEC15P22224 910 aa3.3□□□□□ -1.88
HIT1YJR055W KIN82P25341 720 aa3.3□□□□□ -1.88
HIT1YJR055W PET127P32606 800 aa3.3□□□□□ -1.88
HIT1YJR055W PEX6P33760 1030 aa3.3□□□□□ -1.88
HIT1YJR055W PCM1P38628 557 aaKnown RBP3.3□□□□□ -1.88
HIT1YJR055W BEM4P39011 633 aa3.3□□□□□ -1.88
HIT1YJR055W NUP82P40368 713 aa3.3□□□□□ -1.88
HIT1YJR055W PSA1P41940 361 aaKnown RBP3.3□□□□□ -1.88
HIT1YJR055W GIN4Q12263 1142 aa3.3□□□□□ -1.88
HIT1YJR055W RPS9BP05755 195 aaKnown RBP3.29□□□□□ -1.88
HIT1YJR055W IMG2P25642 146 aaPredicted RBP3.29□□□□□ -1.88
HIT1YJR055W YKL091CP33324 310 aaKnown RBP3.29□□□□□ -1.88
HIT1YJR055W STB2P46679 850 aa3.29□□□□□ -1.88
HIT1YJR055W YPL068CQ02749 293 aa3.29□□□□□ -1.88
HIT1YJR055W UGO1Q03327 502 aa3.29□□□□□ -1.88
HIT1YJR055W YLR125WQ12138 136 aa3.29□□□□□ -1.88
HIT1YJR055W FRE7Q12333 620 aa3.29□□□□□ -1.88
HIT1YJR055W PHO8P11491 566 aa3.28□□□□□ -1.88
HIT1YJR055W SFL1P20134 766 aa3.28□□□□□ -1.88
HIT1YJR055W DAK1P54838 584 aaKnown RBP3.28□□□□□ -1.88
HIT1YJR055W RCR2Q03446 210 aaKnown RBP3.28□□□□□ -1.88
HIT1YJR055W TRS23Q03784 219 aa3.28□□□□□ -1.88
HIT1YJR055W VBA4Q04602 768 aaKnown RBP3.28□□□□□ -1.88
HIT1YJR055W PMA2P19657 947 aa3.27□□□□□ -1.89
HIT1YJR055W ECM32P32644 1121 aaKnown RBP3.27□□□□□ -1.89
HIT1YJR055W ORM2Q06144 216 aa3.27□□□□□ -1.89
HIT1YJR055W IME1P21190 360 aa3.26□□□□□ -1.89
HIT1YJR055W YKU70P32807 602 aa3.26□□□□□ -1.89
HIT1YJR055W THI4P32318 326 aa3.25□□□□□ -1.89
HIT1YJR055W BEM3P32873 1128 aa3.25□□□□□ -1.89
HIT1YJR055W MAL31P38156 614 aa3.25□□□□□ -1.89
HIT1YJR055W RIM4P38741 713 aa3.25□□□□□ -1.89
HIT1YJR055W MEP2P41948 499 aa3.25□□□□□ -1.89
HIT1YJR055W ATP23P53722 227 aa3.25□□□□□ -1.89
HIT1YJR055W YMR210WQ03649 449 aa3.25□□□□□ -1.89
HIT1YJR055W YLR407WQ06070 228 aa3.25□□□□□ -1.89
HIT1YJR055W IRC3Q06683 689 aa3.25□□□□□ -1.89
HIT1YJR055W ZPS1Q12512 249 aa3.25□□□□□ -1.89
HIT1YJR055W RPL7AP05737 244 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms