RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	LPX1	Q12405	387 aa	Known RBP	4.25	□□□□□ -1.73
CTM1	YHR109W	ENT1	Q12518	454 aa		4.25	□□□□□ -1.73
CTM1	YHR109W	FOB1	O13329	566 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	PHO5	P00635	467 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	SNF1	P06782	633 aa	Known RBP	4.24	□□□□□ -1.73
CTM1	YHR109W	POL3	P15436	1097 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	GUK1	P15454	187 aa	Known RBP	4.24	□□□□□ -1.73
CTM1	YHR109W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CTM1	YHR109W	MCM3	P24279	971 aa	Known RBP	4.24	□□□□□ -1.73
CTM1	YHR109W	SWI4	P25302	1093 aa	Known RBP	4.24	□□□□□ -1.73
CTM1	YHR109W	SED4	P25365	1065 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	IFA38	P38286	347 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	AXL2	P38928	823 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	PSF2	P40359	213 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	BUD8	P41698	603 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	FOL2	P51601	243 aa	Known RBP	4.24	□□□□□ -1.73
CTM1	YHR109W	YNR071C	P53757	342 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	ACS1	Q01574	713 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	YMR187C	Q03236	431 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	PLB2	Q03674	706 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	MED1	Q12321	566 aa		4.24	□□□□□ -1.73
CTM1	YHR109W	CLB4	P24871	460 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	YCL049C	P25577	312 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	STE14	P32584	239 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	JNM1	P36224	373 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	YBR138C	P38277	524 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	YEL068C	P39977	110 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	ESL1	P40456	1118 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	TAF4	P50105	388 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	RRT6	P53117	311 aa	Predicted RBP	4.23	□□□□□ -1.73
CTM1	YHR109W	ASI2	P53895	289 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	TRM8	Q12009	286 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
CTM1	YHR109W	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	NFU1	P32860	256 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	SEG2	P34250	1132 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	APL2	P36000	726 aa	Predicted RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	RMA1	P36001	430 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	ETP1	P38748	585 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	VPS8	P39702	1274 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	RAD26	P40352	1085 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	DPH1	P40487	425 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	ARG5,6	Q01217	863 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	PKH1	Q03407	766 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	TSR2	Q06672	205 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	RTP1	Q12751	981 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	AAC3	P18238	307 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	ERG6	P25087	383 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	SEC21	P32074	935 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	PET127	P32606	800 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	PGM1	P33401	570 aa	Known RBP	4.22	□□□□□ -1.73
CTM1	YHR109W	SET3	P36124	751 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	YHR112C	P38716	378 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	GID8	P40208	455 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	VID22	Q05934	901 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	ADY3	Q07732	790 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	SWM1	Q12379	170 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	ECM3	Q99252	613 aa		4.22	□□□□□ -1.73
CTM1	YHR109W	URA3	P03962	267 aa		4.21	□□□□□ -1.74
CTM1	YHR109W	CDC31	P06704	161 aa	Known RBP	4.21	□□□□□ -1.74
CTM1	YHR109W	ADE3	P07245	946 aa	Known RBP	4.21	□□□□□ -1.74
CTM1	YHR109W	ATG19	P35193	415 aa		4.21	□□□□□ -1.74
CTM1	YHR109W	KAP123	P40069	1113 aa	Known RBP	4.21	□□□□□ -1.74
CTM1	YHR109W	CTH1	P47976	325 aa		4.21	□□□□□ -1.74
CTM1	YHR109W	ENP2	P48234	707 aa	Known RBP	4.21	□□□□□ -1.74
CTM1	YHR109W	SQS1	P53866	767 aa	Known RBP	4.21	□□□□□ -1.74
CTM1	YHR109W	HOS1	Q12214	470 aa		4.21	□□□□□ -1.74
CTM1	YHR109W	YLR415C	O13578	112 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	CYC7	P00045	113 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	MTF2	P10849	440 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	UBC1	P21734	215 aa	Known RBP	4.2	□□□□□ -1.74
CTM1	YHR109W	ARG1	P22768	420 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	MTC7	P32633	139 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	XRS2	P33301	854 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	KAE1	P36132	386 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	TAF5	P38129	798 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	URM1	P40554	99 aa	Predicted RBP	4.2	□□□□□ -1.74
CTM1	YHR109W	PXA1	P41909	870 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	UPF3	P48412	387 aa	Known RBP	4.2	□□□□□ -1.74
CTM1	YHR109W	MDR1	P53258	950 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	GPB1	Q08886	897 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	VPS5	Q92331	675 aa		4.2	□□□□□ -1.74
CTM1	YHR109W	RNR1	P21524	888 aa	Known RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	RIT1	P23796	513 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	IMP2'	P32351	346 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	MET12	P46151	657 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	CBK1	P53894	756 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	SLU7	Q02775	382 aa	Known RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	YPL034W	Q03083	165 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	VBA4	Q04602	768 aa	Known RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	SGD1	Q06132	899 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	IWR1	Q07532	353 aa	Predicted RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	MIS1	P09440	975 aa	Known RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	SIR1	P21691	654 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	PRE4	P30657	266 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	CDS1	P38221	457 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	TOS1	P38288	455 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	SSP120	P39931	234 aa	Known RBP	4.19	□□□□□ -1.74
CTM1	YHR109W	BIT61	P47041	543 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	NCS6	P53088	359 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms