RNA–Protein interactions for RNA: YER093C

TSC11, Transcript of Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p), yeast

Gene TSC11, Length 4,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC11	YER093C	HRQ1	Q05549	1077 aa		3.2	□□□□□ -1.9
TSC11	YER093C	YLR407W	Q06070	228 aa		3.2	□□□□□ -1.9
TSC11	YER093C	RPS3	P05750	240 aa	Known RBP	3.2	□□□□□ -1.9
TSC11	YER093C	SPS1	P08458	490 aa		3.2	□□□□□ -1.9
TSC11	YER093C	KRE2	P27809	442 aa		3.2	□□□□□ -1.9
TSC11	YER093C	YBL086C	P38177	466 aa		3.2	□□□□□ -1.9
TSC11	YER093C	LTP1	P40347	161 aa		3.2	□□□□□ -1.9
TSC11	YER093C	SAP185	P40856	1058 aa		3.2	□□□□□ -1.9
TSC11	YER093C	HXT8	P40886	569 aa		3.2	□□□□□ -1.9
TSC11	YER093C	RRT6	P53117	311 aa	Predicted RBP	3.2	□□□□□ -1.9
TSC11	YER093C	MDR1	P53258	950 aa		3.2	□□□□□ -1.9
TSC11	YER093C	NMA111	P53920	997 aa		3.2	□□□□□ -1.9
TSC11	YER093C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
TSC11	YER093C	PHO92	Q06390	306 aa		3.2	□□□□□ -1.9
TSC11	YER093C	TUS1	Q06412	1307 aa		3.2	□□□□□ -1.9
TSC11	YER093C	HTA1	P04911	132 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	HTA2	P04912	132 aa		3.19	□□□□□ -1.9
TSC11	YER093C	PMA2	P19657	947 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ACE2	P21192	770 aa		3.19	□□□□□ -1.9
TSC11	YER093C	TRX1	P22217	103 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	ASF2	P32448	525 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	AFR1	P33304	620 aa		3.19	□□□□□ -1.9
TSC11	YER093C	CUE2	P36075	443 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	CCZ1	P38273	704 aa		3.19	□□□□□ -1.9
TSC11	YER093C	RIM11	P38615	370 aa		3.19	□□□□□ -1.9
TSC11	YER093C	EMW1	P42842	904 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	LAM5	P43560	674 aa		3.19	□□□□□ -1.9
TSC11	YER093C	LYS4	P49367	693 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	UTP8	P53276	713 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	DCP2	P53550	970 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	BSC5	P53755	489 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ARA2	Q04212	335 aa		3.19	□□□□□ -1.9
TSC11	YER093C	DCS1	Q06151	350 aa		3.19	□□□□□ -1.9
TSC11	YER093C	BRE4	Q07660	1125 aa		3.19	□□□□□ -1.9
TSC11	YER093C	CTT1	P06115	562 aa		3.19	□□□□□ -1.9
TSC11	YER093C	FBP1	P09201	348 aa		3.19	□□□□□ -1.9
TSC11	YER093C	AAC3	P18238	307 aa		3.19	□□□□□ -1.9
TSC11	YER093C	PEP3	P27801	918 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ECM4	P36156	370 aa		3.19	□□□□□ -1.9
TSC11	YER093C	PBY1	P38254	753 aa		3.19	□□□□□ -1.9
TSC11	YER093C	HSM3	P38348	480 aa		3.19	□□□□□ -1.9
TSC11	YER093C	DUN1	P39009	513 aa		3.19	□□□□□ -1.9
TSC11	YER093C	YGR067C	P53243	804 aa		3.19	□□□□□ -1.9
TSC11	YER093C	LSC1	P53598	329 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	UGO1	Q03327	502 aa		3.19	□□□□□ -1.9
TSC11	YER093C	HAS1	Q03532	505 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	ADI1	Q03677	179 aa		3.19	□□□□□ -1.9
TSC11	YER093C	RTT10	Q08924	1013 aa		3.19	□□□□□ -1.9
TSC11	YER093C	STF1	P01098	86 aa		3.19	□□□□□ -1.9
TSC11	YER093C	RAD18	P10862	487 aa		3.19	□□□□□ -1.9
TSC11	YER093C	MCM3	P24279	971 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	LCB1	P25045	558 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	GFD2	P25370	566 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	EFB1	P32471	206 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	YME2	P32843	850 aa		3.19	□□□□□ -1.9
TSC11	YER093C	CIN4	P39110	191 aa		3.19	□□□□□ -1.9
TSC11	YER093C	PKP1	P40530	394 aa		3.19	□□□□□ -1.9
TSC11	YER093C	EPL1	P43572	832 aa		3.19	□□□□□ -1.9
TSC11	YER093C	IRC8	P47046	822 aa		3.19	□□□□□ -1.9
TSC11	YER093C	IST1	P53843	298 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	YCS4	Q06156	1176 aa		3.19	□□□□□ -1.9
TSC11	YER093C	THI3	Q07471	609 aa		3.19	□□□□□ -1.9
TSC11	YER093C	OXR1	Q08952	273 aa		3.19	□□□□□ -1.9
TSC11	YER093C	YOR289W	Q12012	251 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	ELG1	Q12050	791 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ACF2	Q12168	779 aa		3.19	□□□□□ -1.9
TSC11	YER093C	NBL1	Q3E7Y6	73 aa		3.19	□□□□□ -1.9
TSC11	YER093C	RPL19A	P0CX82	189 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	RPL19B	P0CX83	189 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	BIK1	P11709	440 aa		3.19	□□□□□ -1.9
TSC11	YER093C	SEN2	P16658	377 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ICL1	P28240	557 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	SSH4	P32343	579 aa		3.19	□□□□□ -1.9
TSC11	YER093C	KNS1	P32350	737 aa	Predicted RBP	3.19	□□□□□ -1.9
TSC11	YER093C	FBP26	P32604	452 aa		3.19	□□□□□ -1.9
TSC11	YER093C	SLA2	P33338	968 aa		3.19	□□□□□ -1.9
TSC11	YER093C	NIC96	P34077	839 aa		3.19	□□□□□ -1.9
TSC11	YER093C	SWH1	P35845	1188 aa		3.19	□□□□□ -1.9
TSC11	YER093C	CHK1	P38147	527 aa		3.19	□□□□□ -1.9
TSC11	YER093C	SSZ1	P38788	538 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	GGA2	P38817	585 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	DSS1	P39112	969 aa		3.19	□□□□□ -1.9
TSC11	YER093C	UTP7	P40055	554 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	SIP5	P40210	489 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	NEO1	P40527	1151 aa		3.19	□□□□□ -1.9
TSC11	YER093C	QRI7	P43122	407 aa		3.19	□□□□□ -1.9
TSC11	YER093C	NIT2	P47016	307 aa		3.19	□□□□□ -1.9
TSC11	YER093C	SAP4	P53036	818 aa		3.19	□□□□□ -1.9
TSC11	YER093C	ADA2	Q02336	434 aa		3.19	□□□□□ -1.9
TSC11	YER093C	YLH47	Q06493	454 aa		3.19	□□□□□ -1.9
TSC11	YER093C	TAF3	Q12297	353 aa		3.19	□□□□□ -1.9
TSC11	YER093C	PGA3	Q12746	312 aa	Known RBP	3.19	□□□□□ -1.9
TSC11	YER093C	TOM70	P07213	617 aa	Known RBP	3.18	□□□□□ -1.9
TSC11	YER093C	ATP12	P22135	325 aa		3.18	□□□□□ -1.9
TSC11	YER093C	AGP1	P25376	633 aa		3.18	□□□□□ -1.9
TSC11	YER093C	YEL043W	P32618	956 aa		3.18	□□□□□ -1.9
TSC11	YER093C	LHS1	P36016	881 aa		3.18	□□□□□ -1.9
TSC11	YER093C	CIR1	P42940	261 aa		3.18	□□□□□ -1.9
TSC11	YER093C	CNN1	P43618	361 aa		3.18	□□□□□ -1.9
TSC11	YER093C	UBP15	P50101	1230 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms