RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C PRP28P23394 588 aa4.53□□□□□ -1.68
RUB1YDR139C PRP22P24384 1145 aaKnown RBP4.53□□□□□ -1.68
RUB1YDR139C EUG1P32474 517 aa4.53□□□□□ -1.68
RUB1YDR139C BCS1P32839 456 aa4.53□□□□□ -1.68
RUB1YDR139C SEC6P32844 805 aa4.53□□□□□ -1.68
RUB1YDR139C YPT7P32939 208 aa4.53□□□□□ -1.68
RUB1YDR139C DUN1P39009 513 aa4.53□□□□□ -1.68
RUB1YDR139C SDS3P40505 327 aa4.53□□□□□ -1.68
RUB1YDR139C PXA1P41909 870 aa4.53□□□□□ -1.68
RUB1YDR139C TMN2Q04562 672 aa4.53□□□□□ -1.68
RUB1YDR139C RGC1Q06108 1083 aaKnown RBP4.53□□□□□ -1.68
RUB1YDR139C TRE2Q08693 809 aa4.53□□□□□ -1.68
RUB1YDR139C RMP1Q12530 201 aa4.53□□□□□ -1.68
RUB1YDR139C IME1P21190 360 aa4.52□□□□□ -1.69
RUB1YDR139C FAT1P38225 669 aa4.52□□□□□ -1.69
RUB1YDR139C SMX3P54999 86 aaPredicted RBP4.52□□□□□ -1.69
RUB1YDR139C RCR2Q03446 210 aaKnown RBP4.52□□□□□ -1.69
RUB1YDR139C CHS5Q12114 671 aaKnown RBP4.52□□□□□ -1.69
RUB1YDR139C TMA17Q12513 150 aa4.52□□□□□ -1.69
RUB1YDR139C SSB1P11484 613 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C GLN4P13188 809 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C AEP2P22136 580 aa4.51□□□□□ -1.69
RUB1YDR139C FEN2P25621 512 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C PAF1P38351 445 aa4.51□□□□□ -1.69
RUB1YDR139C GPP2P40106 250 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C SSB2P40150 613 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C ARG2P40360 574 aa4.51□□□□□ -1.69
RUB1YDR139C YIL077CP40508 320 aa4.51□□□□□ -1.69
RUB1YDR139C VID28P40547 921 aa4.51□□□□□ -1.69
RUB1YDR139C IES1P43579 692 aa4.51□□□□□ -1.69
RUB1YDR139C RNR4P49723 345 aaKnown RBP4.51□□□□□ -1.69
RUB1YDR139C STP4Q07351 490 aa4.51□□□□□ -1.69
RUB1YDR139C MLH3Q12083 715 aa4.51□□□□□ -1.69
RUB1YDR139C THR1P17423 357 aaKnown RBP4.5□□□□□ -1.69
RUB1YDR139C MRC1P25588 1096 aa4.5□□□□□ -1.69
RUB1YDR139C MTH1P35198 433 aa4.5□□□□□ -1.69
RUB1YDR139C YBR071WP38243 211 aa4.5□□□□□ -1.69
RUB1YDR139C NDC80P40460 691 aa4.5□□□□□ -1.69
RUB1YDR139C BUD8P41698 603 aa4.5□□□□□ -1.69
RUB1YDR139C STU2P46675 888 aa4.5□□□□□ -1.69
RUB1YDR139C ENP2P48234 707 aaKnown RBP4.5□□□□□ -1.69
RUB1YDR139C GND2P53319 492 aa4.5□□□□□ -1.69
RUB1YDR139C SPO1P53541 631 aa4.5□□□□□ -1.69
RUB1YDR139C ATG4P53867 494 aa4.5□□□□□ -1.69
RUB1YDR139C SKY1Q03656 742 aa4.5□□□□□ -1.69
RUB1YDR139C NSE5Q03718 556 aa4.5□□□□□ -1.69
RUB1YDR139C YPR027CQ12079 277 aa4.5□□□□□ -1.69
RUB1YDR139C USV1Q12132 391 aa4.5□□□□□ -1.69
RUB1YDR139C ABF1P14164 731 aa4.49□□□□□ -1.69
RUB1YDR139C CDC43P18898 376 aa4.49□□□□□ -1.69
RUB1YDR139C NTH1P32356 751 aa4.49□□□□□ -1.69
RUB1YDR139C DAL3P32459 195 aa4.49□□□□□ -1.69
RUB1YDR139C COS111P38308 924 aa4.49□□□□□ -1.69
RUB1YDR139C NIT2P47016 307 aa4.49□□□□□ -1.69
RUB1YDR139C RFX1P48743 811 aa4.49□□□□□ -1.69
RUB1YDR139C TAF4P50105 388 aa4.49□□□□□ -1.69
RUB1YDR139C YFT2Q06676 274 aa4.49□□□□□ -1.69
RUB1YDR139C IRC10Q08118 586 aa4.49□□□□□ -1.69
RUB1YDR139C CDC26P14724 124 aa4.48□□□□□ -1.69
RUB1YDR139C ACO1P19414 778 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
RUB1YDR139C KIN3P22209 435 aa4.48□□□□□ -1.69
RUB1YDR139C MPS3P47069 682 aa4.48□□□□□ -1.69
RUB1YDR139C YJR120WP47157 116 aa4.48□□□□□ -1.69
RUB1YDR139C CTR1P49573 406 aa4.48□□□□□ -1.69
RUB1YDR139C MRH1Q12117 320 aaPredicted RBP4.48□□□□□ -1.69
RUB1YDR139C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
RUB1YDR139C DMC1P25453 334 aa4.47□□□□□ -1.69
RUB1YDR139C DGR2P32330 852 aa4.47□□□□□ -1.69
RUB1YDR139C SER1P33330 395 aaKnown RBP4.47□□□□□ -1.69
RUB1YDR139C GLG1P36143 616 aa4.47□□□□□ -1.69
RUB1YDR139C CTP1P38152 299 aa4.47□□□□□ -1.69
RUB1YDR139C YJL206CP39529 758 aa4.47□□□□□ -1.69
RUB1YDR139C COG6P53959 839 aa4.47□□□□□ -1.69
RUB1YDR139C HCA4P20448 770 aaKnown RBP4.46□□□□□ -1.7
RUB1YDR139C FUB1P25659 250 aa4.46□□□□□ -1.7
RUB1YDR139C PRE4P30657 266 aa4.46□□□□□ -1.7
RUB1YDR139C MF(ALPHA)2P32435 120 aa4.46□□□□□ -1.7
RUB1YDR139C YPT53P36019 220 aa4.46□□□□□ -1.7
RUB1YDR139C BDH2P39713 417 aa4.46□□□□□ -1.7
RUB1YDR139C EMP65P40085 556 aa4.46□□□□□ -1.7
RUB1YDR139C KHA1P40309 873 aa4.46□□□□□ -1.7
RUB1YDR139C QRI1P43123 477 aaKnown RBP4.46□□□□□ -1.7
RUB1YDR139C SPC105P53148 917 aa4.46□□□□□ -1.7
RUB1YDR139C YGR151CP53287 111 aa4.46□□□□□ -1.7
RUB1YDR139C YSH1Q06224 779 aaPredicted RBP4.46□□□□□ -1.7
RUB1YDR139C YDL086WQ07505 273 aa4.46□□□□□ -1.7
RUB1YDR139C TAF3Q12297 353 aa4.46□□□□□ -1.7
RUB1YDR139C HXT4P32467 576 aa4.45□□□□□ -1.7
RUB1YDR139C SET3P36124 751 aa4.45□□□□□ -1.7
RUB1YDR139C YHR033WP38690 423 aa4.45□□□□□ -1.7
RUB1YDR139C PRM2P40534 656 aa4.45□□□□□ -1.7
RUB1YDR139C SLD3P53135 668 aa4.45□□□□□ -1.7
RUB1YDR139C FOL1P53848 824 aa4.45□□□□□ -1.7
RUB1YDR139C FDC1Q03034 503 aa4.45□□□□□ -1.7
RUB1YDR139C HLR1Q04429 423 aa4.45□□□□□ -1.7
RUB1YDR139C KAR1P11927 433 aa4.44□□□□□ -1.7
RUB1YDR139C GFA1P14742 717 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C COX11P19516 300 aaKnown RBP4.44□□□□□ -1.7
RUB1YDR139C ATP12P22135 325 aa4.44□□□□□ -1.7
RUB1YDR139C MSS1P32559 526 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms