RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	KAR3	P17119	729 aa		4.89	□□□□□ -1.63
APC4	YDR118W	SAT4	P25333	603 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	VBA3	P25594	458 aa		4.89	□□□□□ -1.63
APC4	YDR118W	SPT5	P27692	1063 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	CYS3	P31373	394 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	GCG1	P32656	232 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	ABD1	P32783	436 aa	Predicted RBP	4.89	□□□□□ -1.63
APC4	YDR118W	LTV1	P34078	463 aa		4.89	□□□□□ -1.63
APC4	YDR118W	SEG2	P34250	1132 aa		4.89	□□□□□ -1.63
APC4	YDR118W	RRP14	P36080	434 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
APC4	YDR118W	NOP4	P37838	685 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	YMC2	P38087	329 aa		4.89	□□□□□ -1.63
APC4	YDR118W	QNS1	P38795	714 aa	Known RBP	4.89	□□□□□ -1.63
APC4	YDR118W	ESL1	P40456	1118 aa		4.89	□□□□□ -1.63
APC4	YDR118W	MND1	P53102	219 aa		4.89	□□□□□ -1.63
APC4	YDR118W	AIM41	Q12032	185 aa		4.89	□□□□□ -1.63
APC4	YDR118W	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
APC4	YDR118W	LDB19	Q12502	818 aa		4.89	□□□□□ -1.63
APC4	YDR118W	JIP3	O13555	125 aa		4.88	□□□□□ -1.63
APC4	YDR118W	CDC8	P00572	216 aa		4.88	□□□□□ -1.63
APC4	YDR118W	ADE3	P07245	946 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
APC4	YDR118W	MRP4	P32902	394 aa		4.88	□□□□□ -1.63
APC4	YDR118W	YBL055C	P34220	418 aa	Predicted RBP	4.88	□□□□□ -1.63
APC4	YDR118W	TMN3	P40071	706 aa		4.88	□□□□□ -1.63
APC4	YDR118W	RPT2	P40327	437 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	KTR7	P40504	517 aa		4.88	□□□□□ -1.63
APC4	YDR118W	SNZ3	P43545	298 aa		4.88	□□□□□ -1.63
APC4	YDR118W	RIM8	P53179	542 aa		4.88	□□□□□ -1.63
APC4	YDR118W	SNZ2	P53824	298 aa		4.88	□□□□□ -1.63
APC4	YDR118W	RCR2	Q03446	210 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	ARO80	Q04052	950 aa		4.88	□□□□□ -1.63
APC4	YDR118W	TIF35	Q04067	274 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	UFO1	Q04511	668 aa		4.88	□□□□□ -1.63
APC4	YDR118W	TDA9	Q04545	1251 aa		4.88	□□□□□ -1.63
APC4	YDR118W	ECM30	Q06673	1274 aa		4.88	□□□□□ -1.63
APC4	YDR118W	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	APL5	Q08951	932 aa	Known RBP	4.88	□□□□□ -1.63
APC4	YDR118W	MNL2	Q12205	849 aa		4.88	□□□□□ -1.63
APC4	YDR118W	EST1	P17214	699 aa	Predicted RBP	4.87	□□□□□ -1.63
APC4	YDR118W	CAP1	P28495	268 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	APM2	P38700	605 aa		4.87	□□□□□ -1.63
APC4	YDR118W	SAK1	P38990	1142 aa		4.87	□□□□□ -1.63
APC4	YDR118W	END3	P39013	349 aa		4.87	□□□□□ -1.63
APC4	YDR118W	MIC19	P43594	170 aa		4.87	□□□□□ -1.63
APC4	YDR118W	NOG2	P53742	486 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	STP1	Q00947	519 aa		4.87	□□□□□ -1.63
APC4	YDR118W	YPL034W	Q03083	165 aa		4.87	□□□□□ -1.63
APC4	YDR118W	MUB1	Q03162	620 aa		4.87	□□□□□ -1.63
APC4	YDR118W	YMR187C	Q03236	431 aa		4.87	□□□□□ -1.63
APC4	YDR118W	IVY1	Q04934	453 aa		4.87	□□□□□ -1.63
APC4	YDR118W	TRE1	Q08919	783 aa		4.87	□□□□□ -1.63
APC4	YDR118W	MMP1	Q12372	583 aa		4.87	□□□□□ -1.63
APC4	YDR118W	EMP46	Q12396	444 aa		4.87	□□□□□ -1.63
APC4	YDR118W	FRT1	Q99332	602 aa		4.87	□□□□□ -1.63
APC4	YDR118W	PMS1	P14242	873 aa		4.87	□□□□□ -1.63
APC4	YDR118W	SDH2	P21801	266 aa		4.87	□□□□□ -1.63
APC4	YDR118W	SEC1	P30619	724 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	MET4	P32389	672 aa		4.87	□□□□□ -1.63
APC4	YDR118W	FRE1	P32791	686 aa		4.87	□□□□□ -1.63
APC4	YDR118W	NFU1	P32860	256 aa		4.87	□□□□□ -1.63
APC4	YDR118W	YGL015C	P33199	130 aa		4.87	□□□□□ -1.63
APC4	YDR118W	UBC6	P33296	250 aa	Predicted RBP	4.87	□□□□□ -1.63
APC4	YDR118W	KDX1	P36005	433 aa		4.87	□□□□□ -1.63
APC4	YDR118W	OLA1	P38219	394 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	DSE1	P40077	573 aa		4.87	□□□□□ -1.63
APC4	YDR118W	SPO74	P45819	413 aa		4.87	□□□□□ -1.63
APC4	YDR118W	ASG7	P46993	209 aa		4.87	□□□□□ -1.63
APC4	YDR118W	INP52	P50942	1183 aa		4.87	□□□□□ -1.63
APC4	YDR118W	YGR035C	P53222	116 aa		4.87	□□□□□ -1.63
APC4	YDR118W	SPC98	P53540	846 aa		4.87	□□□□□ -1.63
APC4	YDR118W	FMP30	Q02883	468 aa		4.87	□□□□□ -1.63
APC4	YDR118W	MTG1	Q03151	367 aa	Predicted RBP	4.87	□□□□□ -1.63
APC4	YDR118W	SXM1	Q04175	944 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	ESC8	Q08119	714 aa		4.87	□□□□□ -1.63
APC4	YDR118W	DIS3	Q08162	1001 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	VPS54	Q12071	889 aa		4.87	□□□□□ -1.63
APC4	YDR118W	REC8	Q12188	680 aa		4.87	□□□□□ -1.63
APC4	YDR118W	RIO1	Q12196	484 aa	Known RBP	4.87	□□□□□ -1.63
APC4	YDR118W	GAL80	P04387	435 aa		4.86	□□□□□ -1.63
APC4	YDR118W	TPK1	P06244	397 aa		4.86	□□□□□ -1.63
APC4	YDR118W	PUT4	P15380	627 aa		4.86	□□□□□ -1.63
APC4	YDR118W	GAC1	P28006	793 aa		4.86	□□□□□ -1.63
APC4	YDR118W	TIF5	P38431	405 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	PCM1	P38628	557 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	MMS21	P38632	267 aa		4.86	□□□□□ -1.63
APC4	YDR118W	BOL3	P39724	118 aa		4.86	□□□□□ -1.63
APC4	YDR118W	SIP5	P40210	489 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	TFG1	P41895	735 aa	Predicted RBP	4.86	□□□□□ -1.63
APC4	YDR118W	FOL2	P51601	243 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	UTP6	Q02354	440 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	MDM38	Q08179	573 aa		4.86	□□□□□ -1.63
APC4	YDR118W	AIM39	Q08223	395 aa		4.86	□□□□□ -1.63
APC4	YDR118W	SDH5	Q08230	162 aa		4.86	□□□□□ -1.63
APC4	YDR118W	PKH2	Q12236	1081 aa	Known RBP	4.86	□□□□□ -1.63
APC4	YDR118W	PRP9	P19736	530 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	SFL1	P20134	766 aa		4.85	□□□□□ -1.63
APC4	YDR118W	TRX1	P22217	103 aa	Known RBP	4.85	□□□□□ -1.63
APC4	YDR118W	CAD1	P24813	409 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms