RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
VMA1	YDL185W	ICL1	P28240	557 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	ANP1	P32629	500 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RPC34	P32910	317 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	YKL222C	P35995	705 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	PAM1	P37304	830 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	MSG5	P38590	489 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	YJL055W	P47044	245 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RNR4	P49723	345 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	PSP2	P50109	593 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	PKH1	Q03407	766 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	SYF1	Q04048	859 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	YMR018W	Q04364	514 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	SMC5	Q08204	1093 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	DIA2	Q08496	732 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	RKM1	Q08961	583 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	YPR202W	Q08993	238 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	COR1	P07256	457 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RGR1	P19263	1082 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	DGR2	P32330	852 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	YKL023W	P36103	277 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	GDH3	P39708	457 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	DSE1	P40077	573 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	MET18	P40469	1032 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	SWP82	P43554	623 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	TOS3	P43637	560 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	MSB3	P48566	633 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	SRL4	Q03085	281 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	YDR476C	Q03362	224 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RRI2	Q12348	645 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	ATP2	P00830	511 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	GCR1	P07261	785 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	KIN2	P13186	1147 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	MAK31	P23059	88 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	MRPL25	P23369	157 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
VMA1	YDL185W	RPT5	P33297	434 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	BLI1	P35727	113 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RRT2	P38332	387 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	PRK1	P40494	810 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	LAM5	P43560	674 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	YGL108C	P53139	140 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	DAK1	P54838	584 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	SED5	Q01590	340 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	ASA1	Q06822	443 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	PEX15	Q08215	383 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	RSA1	Q08932	381 aa		4.17	□□□□□ -1.74
VMA1	YDL185W	TMA46	Q12000	345 aa	Known RBP	4.17	□□□□□ -1.74
VMA1	YDL185W	YRF1-3	P0CX14	1859 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YRF1-7	P0CX15	1859 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YRF1-6	P53819	1859 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YML002W	P0CF17	737 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	SSC1	P0CS90	654 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	PRP6	P19735	899 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	RAD14	P28519	371 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YSC84	P32793	468 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	VPS21	P36017	210 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	CUE2	P36075	443 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	SPC42	P36094	363 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	GGA2	P38817	585 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	SPC97	P38863	823 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	STL1	P39932	569 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	RPH1	P39956	796 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	FMP32	P43557	207 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	HAM1	P47119	197 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	YOL036W	Q08206	761 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	MNL2	Q12205	849 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	SPO16	P17122	198 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	PHO3	P24031	467 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	TPS2	P31688	896 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	SEC6	P32844	805 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	TFC4	P33339	1025 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	BOL3	P39724	118 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	DLD3	P39976	496 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	SDS3	P40505	327 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	SNL1	P40548	159 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	ALA1	P40825	983 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	HXT8	P40886	569 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	VMA10	P48836	114 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	ITT1	Q04638	464 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	COQ9	Q05779	260 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	TOS4	Q06266	489 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	TUM1	Q08686	304 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	RIM15	P43565	1770 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	MAK16	P10962	306 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	PEX2	P32800	271 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	RAD54	P32863	898 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	KTR2	P33550	425 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	KDX1	P36005	433 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	MRX3	P38172	270 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	HIS2	P38635	335 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	IOC3	P43596	787 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	LIA1	P47120	325 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	PSP1	P50896	841 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	MSN5	P52918	1224 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	PAN2	P53010	1115 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	NMA2	P53204	395 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YNL115C	P53925	644 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	MYO5	Q04439	1219 aa	Known RBP	4.16	□□□□□ -1.74
VMA1	YDL185W	FUS2	Q05670	677 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms