RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W YHR202WP38887 602 aa2.11□□□□□ -2.07
MSH5YDL154W EXG2P52911 562 aa2.11□□□□□ -2.07
MSH5YDL154W ECM9Q02202 377 aa2.11□□□□□ -2.07
MSH5YDL154W ASM4Q05166 528 aa2.11□□□□□ -2.07
MSH5YDL154W VHS3Q08438 674 aa2.11□□□□□ -2.07
MSH5YDL154W RPS21BQ3E754 87 aaKnown RBP2.11□□□□□ -2.07
MSH5YDL154W RPS9BP05755 195 aaKnown RBP2.1□□□□□ -2.07
MSH5YDL154W PLC1P32383 869 aa2.1□□□□□ -2.07
MSH5YDL154W YKU70P32807 602 aa2.1□□□□□ -2.07
MSH5YDL154W SEC6P32844 805 aa2.1□□□□□ -2.07
MSH5YDL154W BIT2P38346 545 aa2.1□□□□□ -2.07
MSH5YDL154W MIP6P38760 659 aaKnown RBP2.1□□□□□ -2.07
MSH5YDL154W CCT5P40413 562 aaKnown RBP2.1□□□□□ -2.07
MSH5YDL154W DUS4Q06063 367 aa2.1□□□□□ -2.07
MSH5YDL154W KCS1Q12494 1050 aa2.1□□□□□ -2.07
MSH5YDL154W SOD2P00447 233 aa2.1□□□□□ -2.07
MSH5YDL154W FBP1P09201 348 aa2.1□□□□□ -2.07
MSH5YDL154W STE14P32584 239 aa2.1□□□□□ -2.07
MSH5YDL154W OAF3P36023 863 aa2.1□□□□□ -2.07
MSH5YDL154W RIM4P38741 713 aa2.1□□□□□ -2.07
MSH5YDL154W RPP1P38786 293 aa2.1□□□□□ -2.07
MSH5YDL154W CHA4P43634 648 aa2.1□□□□□ -2.07
MSH5YDL154W REC102Q02721 264 aa2.1□□□□□ -2.07
MSH5YDL154W YDR132CQ03900 495 aa2.1□□□□□ -2.07
MSH5YDL154W DIA2Q08496 732 aaPredicted RBP2.1□□□□□ -2.07
MSH5YDL154W TRM11Q12463 433 aa2.1□□□□□ -2.07
MSH5YDL154W NUP157P40064 1391 aaKnown RBP2.1□□□□□ -2.07
MSH5YDL154W ERG20P08524 352 aaKnown RBP2.09□□□□□ -2.07
MSH5YDL154W KAR4P25583 335 aa2.09□□□□□ -2.07
MSH5YDL154W HIR1P32479 840 aa2.09□□□□□ -2.07
MSH5YDL154W NIC96P34077 839 aa2.09□□□□□ -2.07
MSH5YDL154W YKL133CP36066 463 aa2.09□□□□□ -2.07
MSH5YDL154W NIT2P47016 307 aa2.09□□□□□ -2.07
MSH5YDL154W AVT1P47082 602 aa2.09□□□□□ -2.07
MSH5YDL154W YJR039WP47107 1121 aa2.09□□□□□ -2.07
MSH5YDL154W CTK1Q03957 528 aaKnown RBP2.09□□□□□ -2.07
MSH5YDL154W DCS2Q12123 353 aa2.09□□□□□ -2.07
MSH5YDL154W TEL1P38110 2787 aa2.09□□□□□ -2.07
MSH5YDL154W YLR358CO13565 187 aa2.09□□□□□ -2.08
MSH5YDL154W RPS17AP02407 136 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W RPS21AP0C0V8 87 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W SST2P11972 698 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W RPS17BP14127 136 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W PFK1P16861 987 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W TRZ1P36159 838 aaPredicted RBP2.09□□□□□ -2.08
MSH5YDL154W SIC1P38634 284 aa2.09□□□□□ -2.08
MSH5YDL154W SSZ1P38788 538 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W GPP2P40106 250 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W VID28P40547 921 aa2.09□□□□□ -2.08
MSH5YDL154W ENP2P48234 707 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W BRE5P53741 515 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W SQS1P53866 767 aaKnown RBP2.09□□□□□ -2.08
MSH5YDL154W PPN1Q04119 674 aa2.09□□□□□ -2.08
MSH5YDL154W MCM21Q06675 368 aa2.09□□□□□ -2.08
MSH5YDL154W PEX15Q08215 383 aa2.09□□□□□ -2.08
MSH5YDL154W HFI1Q12060 488 aa2.09□□□□□ -2.08
MSH5YDL154W IMG2P25642 146 aaPredicted RBP2.08□□□□□ -2.08
MSH5YDL154W HIS7P33734 552 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W YHR033WP38690 423 aa2.08□□□□□ -2.08
MSH5YDL154W MPT5P39016 859 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
MSH5YDL154W SAW1P39735 261 aa2.08□□□□□ -2.08
MSH5YDL154W NUG1P40010 520 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W MNN10P50108 393 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W YNL034WP53963 612 aa2.08□□□□□ -2.08
MSH5YDL154W YNL018CP53976 612 aa2.08□□□□□ -2.08
MSH5YDL154W YLR407WQ06070 228 aa2.08□□□□□ -2.08
MSH5YDL154W CDA2Q06703 312 aa2.08□□□□□ -2.08
MSH5YDL154W AIM39Q08223 395 aa2.08□□□□□ -2.08
MSH5YDL154W TGL5Q12043 749 aa2.08□□□□□ -2.08
MSH5YDL154W CDC6P09119 513 aa2.08□□□□□ -2.08
MSH5YDL154W SWI6P09959 803 aa2.08□□□□□ -2.08
MSH5YDL154W CAF20P12962 161 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W GLN4P13188 809 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W ADE2P21264 571 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W APL2P36000 726 aaPredicted RBP2.08□□□□□ -2.08
MSH5YDL154W ARP4P80428 489 aa2.08□□□□□ -2.08
MSH5YDL154W DLT1Q04216 342 aa2.08□□□□□ -2.08
MSH5YDL154W VBA4Q04602 768 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W IMH1Q06704 911 aaKnown RBP2.08□□□□□ -2.08
MSH5YDL154W TUB3P09734 445 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W STE11P23561 717 aa2.07□□□□□ -2.08
MSH5YDL154W RNQ1P25367 405 aa2.07□□□□□ -2.08
MSH5YDL154W HEM12P32347 362 aaPredicted RBP2.07□□□□□ -2.08
MSH5YDL154W PEX2P32800 271 aa2.07□□□□□ -2.08
MSH5YDL154W SDS22P36047 338 aa2.07□□□□□ -2.08
MSH5YDL154W AKL1P38080 1108 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W HXT6P39003 570 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W HXT7P39004 570 aa2.07□□□□□ -2.08
MSH5YDL154W BEM4P39011 633 aa2.07□□□□□ -2.08
MSH5YDL154W YIR042CP40586 236 aa2.07□□□□□ -2.08
MSH5YDL154W PXA1P41909 870 aa2.07□□□□□ -2.08
MSH5YDL154W MUP1P50276 574 aa2.07□□□□□ -2.08
MSH5YDL154W MDR1P53258 950 aa2.07□□□□□ -2.08
MSH5YDL154W ECM38Q05902 660 aaPredicted RBP2.07□□□□□ -2.08
MSH5YDL154W ENB1Q08299 606 aa2.07□□□□□ -2.08
MSH5YDL154W ECM3Q99252 613 aa2.07□□□□□ -2.08
MSH5YDL154W PRP8P33334 2413 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W ATP4P05626 244 aa2.07□□□□□ -2.08
MSH5YDL154W FRS1P15624 595 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W PHO81P17442 1178 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 130.7 ms