RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W KIN82P25341 720 aa8.27□□□□□ -1.09
ABP1YCR088W AAD3P25612 363 aa8.27□□□□□ -1.09
ABP1YCR088W UTR4P32626 227 aa8.27□□□□□ -1.09
ABP1YCR088W YSC84P32793 468 aa8.27□□□□□ -1.09
ABP1YCR088W MSR1P38714 643 aa8.27□□□□□ -1.09
ABP1YCR088W LIA1P47120 325 aaKnown RBP8.27□□□□□ -1.09
ABP1YCR088W USE1P53146 245 aa8.27□□□□□ -1.09
ABP1YCR088W OSH6Q02201 448 aa8.27□□□□□ -1.09
ABP1YCR088W PEX29Q03370 554 aa8.27□□□□□ -1.09
ABP1YCR088W PRM6Q04705 352 aa8.27□□□□□ -1.09
ABP1YCR088W GTB1Q04924 702 aa8.27□□□□□ -1.09
ABP1YCR088W ADE13Q05911 482 aaKnown RBP8.27□□□□□ -1.09
ABP1YCR088W SMC5Q08204 1093 aa8.27□□□□□ -1.09
ABP1YCR088W VHS3Q08438 674 aa8.27□□□□□ -1.09
ABP1YCR088W GIS3Q12418 502 aa8.27□□□□□ -1.09
ABP1YCR088W RIF1P29539 1916 aa8.26□□□□□ -1.09
ABP1YCR088W TEF1P02994 458 aaKnown RBP8.26□□□□□ -1.09
ABP1YCR088W RPL24AP04449 155 aaKnown RBP8.26□□□□□ -1.09
ABP1YCR088W ILS1P09436 1072 aaKnown RBP8.26□□□□□ -1.09
ABP1YCR088W CDC20P26309 610 aa8.26□□□□□ -1.09
ABP1YCR088W RPC19P28000 142 aaKnown RBP8.26□□□□□ -1.09
ABP1YCR088W MRE11P32829 692 aa8.26□□□□□ -1.09
ABP1YCR088W ETR1P38071 380 aa8.26□□□□□ -1.09
ABP1YCR088W QNS1P38795 714 aaKnown RBP8.26□□□□□ -1.09
ABP1YCR088W FLC2P39719 783 aa8.26□□□□□ -1.09
ABP1YCR088W SAW1P39735 261 aa8.26□□□□□ -1.09
ABP1YCR088W YJL107CP42947 387 aa8.26□□□□□ -1.09
ABP1YCR088W KTR5P53966 522 aaPredicted RBP8.26□□□□□ -1.09
ABP1YCR088W OCA6Q12454 224 aa8.26□□□□□ -1.09
ABP1YCR088W CSR2Q12734 1121 aa8.26□□□□□ -1.09
ABP1YCR088W YDJ1P25491 409 aaKnown RBP8.25□□□□□ -1.09
ABP1YCR088W BCS1P32839 456 aa8.25□□□□□ -1.09
ABP1YCR088W FTR1P40088 404 aa8.25□□□□□ -1.09
ABP1YCR088W SIP5P40210 489 aaKnown RBP8.25□□□□□ -1.09
ABP1YCR088W SAE2P46946 345 aa8.25□□□□□ -1.09
ABP1YCR088W RNR4P49723 345 aaKnown RBP8.25□□□□□ -1.09
ABP1YCR088W ERV41Q04651 352 aa8.25□□□□□ -1.09
ABP1YCR088W YET3Q07451 203 aa8.25□□□□□ -1.09
ABP1YCR088W NPP1P25353 742 aa8.25□□□□□ -1.09
ABP1YCR088W SIN4P32259 974 aa8.25□□□□□ -1.09
ABP1YCR088W TOA1P32773 286 aa8.25□□□□□ -1.09
ABP1YCR088W GLC3P32775 704 aa8.25□□□□□ -1.09
ABP1YCR088W COY1P34237 679 aa8.25□□□□□ -1.09
ABP1YCR088W REG2P38232 338 aa8.25□□□□□ -1.09
ABP1YCR088W ALG5P40350 334 aa8.25□□□□□ -1.09
ABP1YCR088W ARG2P40360 574 aa8.25□□□□□ -1.09
ABP1YCR088W TMA108P40462 946 aa8.25□□□□□ -1.09
ABP1YCR088W ASG7P46993 209 aa8.25□□□□□ -1.09
ABP1YCR088W PAN2P53010 1115 aaPredicted RBP8.25□□□□□ -1.09
ABP1YCR088W YGR125WP53273 1036 aa8.25□□□□□ -1.09
ABP1YCR088W RNY1Q02933 434 aaKnown RBP8.25□□□□□ -1.09
ABP1YCR088W KAP95Q06142 861 aaKnown RBP8.25□□□□□ -1.09
ABP1YCR088W ERP3Q12403 225 aa8.25□□□□□ -1.09
ABP1YCR088W YDR461C-AQ2V2P7 80 aa8.25□□□□□ -1.09
ABP1YCR088W LAA1P39526 2014 aa8.24□□□□□ -1.09
ABP1YCR088W TY1B-AO13527 1196 aaKnown RBP8.24□□□□□ -1.09
ABP1YCR088W YER152CP10356 443 aa8.24□□□□□ -1.09
ABP1YCR088W COX11P19516 300 aaKnown RBP8.24□□□□□ -1.09
ABP1YCR088W URA7P28274 579 aaKnown RBP8.24□□□□□ -1.09
ABP1YCR088W YDR089WP38966 869 aa8.24□□□□□ -1.09
ABP1YCR088W EAF5P39995 279 aa8.24□□□□□ -1.09
ABP1YCR088W TAF1P46677 1066 aa8.24□□□□□ -1.09
ABP1YCR088W TPO2P53283 614 aa8.24□□□□□ -1.09
ABP1YCR088W DAK1P54838 584 aaKnown RBP8.24□□□□□ -1.09
ABP1YCR088W GPD1Q00055 391 aaKnown RBP8.24□□□□□ -1.09
ABP1YCR088W TRS130Q03660 1102 aa8.24□□□□□ -1.09
ABP1YCR088W FMN1Q03778 218 aa8.24□□□□□ -1.09
ABP1YCR088W THI7Q05998 598 aa8.24□□□□□ -1.09
ABP1YCR088W GPI13Q07830 1017 aa8.24□□□□□ -1.09
ABP1YCR088W OSW2Q12202 724 aa8.24□□□□□ -1.09
ABP1YCR088W SLY1P22213 666 aa8.23□□□□□ -1.09
ABP1YCR088W TKL1P23254 680 aaKnown RBP8.23□□□□□ -1.09
ABP1YCR088W IRE1P32361 1115 aa8.23□□□□□ -1.09
ABP1YCR088W TVP38P36164 337 aa8.23□□□□□ -1.09
ABP1YCR088W UBP14P38237 781 aaKnown RBP8.23□□□□□ -1.09
ABP1YCR088W ARI1P53111 347 aaKnown RBP8.23□□□□□ -1.09
ABP1YCR088W NMA111P53920 997 aa8.23□□□□□ -1.09
ABP1YCR088W NOP15P53927 220 aaPredicted RBP8.23□□□□□ -1.09
ABP1YCR088W SND1Q04007 877 aa8.23□□□□□ -1.09
ABP1YCR088W HFD1Q04458 532 aa8.23□□□□□ -1.09
ABP1YCR088W SHS1Q07657 551 aa8.23□□□□□ -1.09
ABP1YCR088W NKP1Q12493 238 aa8.23□□□□□ -1.09
ABP1YCR088W RPL4AP10664 362 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W NAT1P12945 854 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W MEI4P29467 408 aa8.22□□□□□ -1.09
ABP1YCR088W DPH5P32469 300 aaPredicted RBP8.22□□□□□ -1.09
ABP1YCR088W VID24P38263 362 aa8.22□□□□□ -1.09
ABP1YCR088W PRK1P40494 810 aa8.22□□□□□ -1.09
ABP1YCR088W GVP36P40531 326 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W SNZ3P43545 298 aa8.22□□□□□ -1.09
ABP1YCR088W RPL4BP49626 362 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W MCM6P53091 1017 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W CUL3P53202 744 aa8.22□□□□□ -1.09
ABP1YCR088W SNZ2P53824 298 aa8.22□□□□□ -1.09
ABP1YCR088W ELP3Q02908 557 aaKnown RBP8.22□□□□□ -1.09
ABP1YCR088W ACL4Q03771 387 aa8.22□□□□□ -1.09
ABP1YCR088W EMP46Q12396 444 aa8.22□□□□□ -1.09
ABP1YCR088W STB3Q12427 513 aa8.22□□□□□ -1.09
ABP1YCR088W YCR015CP25616 317 aa8.22□□□□□ -1.09
ABP1YCR088W RRN3P36070 627 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 154 ms