RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C MCM3P24279 971 aaKnown RBP2.7□□□□□ -1.98
PRP6YBR055C PAH1P32567 862 aa2.7□□□□□ -1.98
PRP6YBR055C MND2P40577 368 aa2.7□□□□□ -1.98
PRP6YBR055C SAP4P53036 818 aa2.7□□□□□ -1.98
PRP6YBR055C MUS81Q04149 632 aaPredicted RBP2.7□□□□□ -1.98
PRP6YBR055C GPR1Q12361 961 aa2.7□□□□□ -1.98
PRP6YBR055C MIS1P09440 975 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C MTF2P10849 440 aa2.69□□□□□ -1.98
PRP6YBR055C CHS2P14180 963 aa2.69□□□□□ -1.98
PRP6YBR055C UBC1P21734 215 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C SWI4P25302 1093 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C BLI1P35727 113 aa2.69□□□□□ -1.98
PRP6YBR055C YBR138CP38277 524 aa2.69□□□□□ -1.98
PRP6YBR055C IFA38P38286 347 aa2.69□□□□□ -1.98
PRP6YBR055C UBS1P38290 277 aa2.69□□□□□ -1.98
PRP6YBR055C UME6P39001 836 aa2.69□□□□□ -1.98
PRP6YBR055C SSP120P39931 234 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C YNL195CP40168 261 aa2.69□□□□□ -1.98
PRP6YBR055C FAF1P40546 346 aaPredicted RBP2.69□□□□□ -1.98
PRP6YBR055C MAD2P40958 196 aa2.69□□□□□ -1.98
PRP6YBR055C VTC2P43585 828 aa2.69□□□□□ -1.98
PRP6YBR055C PRP31P49704 494 aaPredicted RBP2.69□□□□□ -1.98
PRP6YBR055C FOL2P51601 243 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C SQS1P53866 767 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C RCR2Q03446 210 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C TDA6Q06466 467 aa2.69□□□□□ -1.98
PRP6YBR055C SNU66Q12420 587 aaPredicted RBP2.69□□□□□ -1.98
PRP6YBR055C VPS5Q92331 675 aa2.69□□□□□ -1.98
PRP6YBR055C GAL10P04397 699 aa2.69□□□□□ -1.98
PRP6YBR055C FRS1P15624 595 aaKnown RBP2.69□□□□□ -1.98
PRP6YBR055C SED4P25365 1065 aa2.69□□□□□ -1.98
PRP6YBR055C COQ2P32378 372 aa2.69□□□□□ -1.98
PRP6YBR055C PET127P32606 800 aa2.69□□□□□ -1.98
PRP6YBR055C TFC3P34111 1160 aa2.69□□□□□ -1.98
PRP6YBR055C VHR1P40522 640 aa2.69□□□□□ -1.98
PRP6YBR055C TAF4P50105 388 aa2.69□□□□□ -1.98
PRP6YBR055C RRT6P53117 311 aaPredicted RBP2.69□□□□□ -1.98
PRP6YBR055C YNR071CP53757 342 aa2.69□□□□□ -1.98
PRP6YBR055C CBK1P53894 756 aa2.69□□□□□ -1.98
PRP6YBR055C VPS36Q06696 566 aa2.69□□□□□ -1.98
PRP6YBR055C SDH5Q08230 162 aa2.69□□□□□ -1.98
PRP6YBR055C DIN7Q12086 430 aa2.69□□□□□ -1.98
PRP6YBR055C HOS1Q12214 470 aa2.69□□□□□ -1.98
PRP6YBR055C LEU2P04173 364 aaPredicted RBP2.68□□□□□ -1.98
PRP6YBR055C PFK2P16862 959 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
PRP6YBR055C IME1P21190 360 aa2.68□□□□□ -1.98
PRP6YBR055C RAD16P31244 790 aa2.68□□□□□ -1.98
PRP6YBR055C SAF1P38352 637 aa2.68□□□□□ -1.98
PRP6YBR055C NOP16P40007 231 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C MDR1P53258 950 aa2.68□□□□□ -1.98
PRP6YBR055C GTF1P53260 183 aaPredicted RBP2.68□□□□□ -1.98
PRP6YBR055C IWR1Q07532 353 aaPredicted RBP2.68□□□□□ -1.98
PRP6YBR055C THI72Q08579 599 aa2.68□□□□□ -1.98
PRP6YBR055C TRM8Q12009 286 aa2.68□□□□□ -1.98
PRP6YBR055C ATG11Q12527 1178 aa2.68□□□□□ -1.98
PRP6YBR055C TCB3Q03640 1545 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C CYC1P00044 109 aaPredicted RBP2.68□□□□□ -1.98
PRP6YBR055C URA3P03962 267 aa2.68□□□□□ -1.98
PRP6YBR055C MRP7P12687 371 aa2.68□□□□□ -1.98
PRP6YBR055C ADE2P21264 571 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C SIR1P21691 654 aa2.68□□□□□ -1.98
PRP6YBR055C RIT1P23796 513 aa2.68□□□□□ -1.98
PRP6YBR055C GBP2P25555 427 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
PRP6YBR055C ATG19P35193 415 aa2.68□□□□□ -1.98
PRP6YBR055C SET3P36124 751 aa2.68□□□□□ -1.98
PRP6YBR055C MSS4P38994 779 aa2.68□□□□□ -1.98
PRP6YBR055C BUD8P41698 603 aa2.68□□□□□ -1.98
PRP6YBR055C PXA1P41909 870 aa2.68□□□□□ -1.98
PRP6YBR055C UPF3P48412 387 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C RBG2P53295 368 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C ASI2P53895 289 aa2.68□□□□□ -1.98
PRP6YBR055C ACS1Q01574 713 aa2.68□□□□□ -1.98
PRP6YBR055C PKH1Q03407 766 aa2.68□□□□□ -1.98
PRP6YBR055C CSR1Q06705 408 aaKnown RBP2.68□□□□□ -1.98
PRP6YBR055C TPO1Q07824 586 aa2.68□□□□□ -1.98
PRP6YBR055C ADE3P07245 946 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C GCD1P09032 578 aaPredicted RBP2.67□□□□□ -1.98
PRP6YBR055C PCK1P10963 549 aa2.67□□□□□ -1.98
PRP6YBR055C MSB1P21339 1137 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C MRPL36P36531 177 aa2.67□□□□□ -1.98
PRP6YBR055C APT2P36973 181 aa2.67□□□□□ -1.98
PRP6YBR055C MCX1P38323 520 aaPredicted RBP2.67□□□□□ -1.98
PRP6YBR055C YLF2P38746 405 aa2.67□□□□□ -1.98
PRP6YBR055C CTF18P49956 741 aa2.67□□□□□ -1.98
PRP6YBR055C NSE5Q03718 556 aa2.67□□□□□ -1.98
PRP6YBR055C VBA4Q04602 768 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C GSF2Q04697 403 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C RGA2Q06407 1009 aa2.67□□□□□ -1.98
PRP6YBR055C VIP1Q06685 1146 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C UPC2Q12151 913 aa2.67□□□□□ -1.98
PRP6YBR055C BET2P20133 325 aa2.67□□□□□ -1.98
PRP6YBR055C ARG1P22768 420 aa2.67□□□□□ -1.98
PRP6YBR055C RMA1P36001 430 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C TEF4P36008 412 aaKnown RBP2.67□□□□□ -1.98
PRP6YBR055C BCD1P38772 366 aa2.67□□□□□ -1.98
PRP6YBR055C SLN1P39928 1220 aaPredicted RBP2.67□□□□□ -1.98
PRP6YBR055C YER010CP40011 234 aa2.67□□□□□ -1.98
PRP6YBR055C GID8P40208 455 aa2.67□□□□□ -1.98
PRP6YBR055C LYS14P40971 790 aa2.67□□□□□ -1.98
PRP6YBR055C CCT8P47079 568 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms