RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 TAF1P21675 1872 aa13.24□□□□□ -0.29
CSPG4P10-202ENST00000612093 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
CSPG4P10-202ENST00000612093 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
CSPG4P10-202ENST00000612093 SYT1P21579 422 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 GJB2P29033 226 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 HSPA4P34932 840 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 HIP1O00291 1037 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 PROM2Q8N271 834 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 C4AP0C0L4 1744 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 LUZP1Q86V48 1076 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 SYAP1Q96A49 352 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 CCDC171Q6TFL3 1326 aa13.23□□□□□ -0.29
CSPG4P10-202ENST00000612093 RXRBP28702 533 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 ZAP70P43403 619 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 PHKA1P46020 1223 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 LRMPQ12912 555 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 NFIXQ14938 502 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 SNX14Q9Y5W7 946 aa13.22□□□□□ -0.29
CSPG4P10-202ENST00000612093 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 STX6O43752 255 aa13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 BRD1O95696 1058 aa13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 MBD3O95983 291 aa13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 PUM3Q15397 648 aaKnown RBP13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
CSPG4P10-202ENST00000612093 LRP5O75197 1615 aa13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 APBA3O96018 575 aa13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 BICD2Q8TD16 824 aa13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.3
CSPG4P10-202ENST00000612093 LAMB2P55268 1798 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 MCAMP43121 646 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 ANAPC15P60006 121 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 CHRNDQ07001 517 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 CHST3Q7LGC8 479 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 NOLC1Q14978 699 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
CSPG4P10-202ENST00000612093 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 LPIN2Q92539 896 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 PYCARDQ9ULZ3 195 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 FGFR2P21802 821 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 PTGS1P23219 599 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 GYS1P13807 737 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 TRIM5Q9C035 493 aa13.19□□□□□ -0.3
CSPG4P10-202ENST00000612093 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 SLC5A1P13866 664 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 TRMT1Q9NXH9 659 aaKnown RBP13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 RGL2O15211 777 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P10-202ENST00000612093 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 BCAMP50895 628 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 ADRA2BP18089 450 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 WASHC4Q2M389 1173 aa13.17□□□□□ -0.3
CSPG4P10-202ENST00000612093 SLC27A2O14975 620 aa13.16□□□□□ -0.3
CSPG4P10-202ENST00000612093 AP5Z1O43299 807 aa13.16□□□□□ -0.3
CSPG4P10-202ENST00000612093 LIG1P18858 919 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms