RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 WNT7AO00755 349 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
FOXN3-215ENST00000557261 NOS2P35228 1153 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 CEBPAP49715 358 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-215ENST00000557261 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
FOXN3-215ENST00000557261 TREML1Q86YW5 311 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.11□□□□□ -1.11
FOXN3-215ENST00000557261 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 SPACA7Q96KW9 195 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 PHACTR1Q9C0D0 580 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 OSBPL2Q9H1P3 480 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 USP20Q9Y2K6 914 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
FOXN3-215ENST00000557261 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
FOXN3-215ENST00000557261 AVPP01185 164 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 PAK2Q13177 524 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 FBF1Q8TES7 1133 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 TESK2Q96S53 571 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 MED14O60244 1454 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 ADGRB2O60241 1585 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 PLEKHG1Q9ULL1 1385 aa8.1□□□□□ -1.11
FOXN3-215ENST00000557261 ST20-MTHFSA0A0A6YYL1 179 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 F6X3S4 739 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 MLECQ14165 292 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 TEAD4Q15561 434 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 RTN1Q16799 776 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 ZNF746Q6NUN9 644 aaPredicted RBP8.09□□□□□ -1.11
FOXN3-215ENST00000557261 EHBP1Q8NDI1 1231 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 FHDC1Q9C0D6 1143 aaPredicted RBP8.09□□□□□ -1.11
FOXN3-215ENST00000557261 MRPL42Q9Y6G3 142 aaKnown RBP8.09□□□□□ -1.11
FOXN3-215ENST00000557261 LTBP4Q8N2S1 1624 aa8.09□□□□□ -1.11
FOXN3-215ENST00000557261 AXIN1O15169 862 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 TXLNAP40222 546 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 USP5P45974 858 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 CCDC116Q8IYX3 515 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
FOXN3-215ENST00000557261 C12orf49Q9H741 205 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
FOXN3-215ENST00000557261 YTHDC2Q9H6S0 1430 aaKnown RBP8.08□□□□□ -1.12
FOXN3-215ENST00000557261 XRN1Q8IZH2 1706 aaKnown RBP8.08□□□□□ -1.12
FOXN3-215ENST00000557261 IQSEC2Q5JU85 1478 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 FAM135BQ49AJ0 1406 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 STK10O94804 968 aaKnown RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 POLR3DP05423 398 aaPredicted RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 HIRAP54198 1017 aaPredicted RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 TMF1P82094 1093 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 CBLBQ13191 982 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 RC3H1Q5TC82 1133 aaKnown RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 ESYT1Q9BSJ8 1104 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 LRPPRCP42704 1394 aaKnown RBP8.07□□□□□ -1.12
FOXN3-215ENST00000557261 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 NINLQ9Y2I6 1382 aa8.07□□□□□ -1.12
FOXN3-215ENST00000557261 ADAMTS13Q76LX8 1427 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
FOXN3-215ENST00000557261 CCER2I3L3R5 266 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 SMPD1P17405 629 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 GJA8P48165 433 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 WNT7BP56706 349 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 CENPCQ03188 943 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
FOXN3-215ENST00000557261 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
FOXN3-215ENST00000557261 CCDC74AQ96AQ1 378 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 CHMP3Q9Y3E7 222 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 TULP4Q9NRJ4 1543 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 ABCC11Q96J66 1382 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 PIK3R4Q99570 1358 aa8.06□□□□□ -1.12
FOXN3-215ENST00000557261 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
FOXN3-215ENST00000557261 PTCH1Q13635 1447 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 J3QL48 77 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 SIAH2O43255 324 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 CPNE3O75131 537 aaKnown RBP8.05□□□□□ -1.12
FOXN3-215ENST00000557261 RAB11FIP3O75154 756 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 DDX10Q13206 875 aaKnown RBP8.05□□□□□ -1.12
FOXN3-215ENST00000557261 AGBL1Q96MI9 1066 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
FOXN3-215ENST00000557261 NPC1L1Q9UHC9 1359 aa8.05□□□□□ -1.12
FOXN3-215ENST00000557261 USP17L7P0C7H9 530 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-215ENST00000557261 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-215ENST00000557261 NXPE4Q6UWF7 544 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 ERMP1Q7Z2K6 904 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-215ENST00000557261 GPRASP2Q96D09 838 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 FRMD6Q96NE9 622 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 NWD1Q149M9 1564 aa8.04□□□□□ -1.12
FOXN3-215ENST00000557261 ANKRD26Q9UPS8 1709 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms