RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 C21orf2O43822 256 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 LRRC24Q50LG9 513 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 Q6ZUG5 572 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 NECAB1Q8N987 351 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 OVOS2A0A0G2JMS6 1433 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 OVOS2A0A0J9YW53 1432 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 OVOS2Q6IE36 1432 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 PPRC1Q5VV67 1664 aaKnown RBP9.22□□□□□ -0.93
CTNND1-230ENST00000532245 RAD17O75943 681 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 RXRAP19793 462 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 GNAQP50148 359 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 TRAF1Q13077 416 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
CTNND1-230ENST00000532245 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.93
CTNND1-230ENST00000532245 CEP170BQ9Y4F5 1589 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-230ENST00000532245 PIM2Q9P1W9 311 aa9.21□□□□□ -0.93
CTNND1-230ENST00000532245 CSADQ9Y600 493 aa9.21□□□□□ -0.93
CTNND1-230ENST00000532245 SP4Q02446 784 aa9.21□□□□□ -0.93
CTNND1-230ENST00000532245 RRP36Q96EU6 259 aaKnown RBP9.21□□□□□ -0.93
CTNND1-230ENST00000532245 GJB2P29033 226 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 TNFAIP1Q13829 316 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC93Q567U6 631 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 SMIM5Q71RC9 77 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 OTUD7AQ8TE49 926 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-230ENST00000532245 XDHP47989 1333 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 TRIM5Q9C035 493 aa9.21□□□□□ -0.94
CTNND1-230ENST00000532245 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.94
CTNND1-230ENST00000532245 INO80Q9ULG1 1556 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 USP44Q9H0E7 712 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SPDYE3A6NKU9 549 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SERPINC1P01008 464 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SMCR8Q8TEV9 937 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■■■ 38.5
CTNND1-230ENST00000532245 ZNF532Q9HCE3 1301 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 E9PCH4 1651 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CLRN2A0PK11 232 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 GPAA1O43292 621 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CALM1P0DP23 149 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CALM2P0DP24 149 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CALM3P0DP25 149 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 USP48Q86UV5 1035 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PANK2Q9BZ23 570 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PIK3C2BO00750 1634 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 B4DLN1 442 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 LETM1O95202 739 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 MRPL12P52815 198 aaKnown RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 TCP11L1Q9NUJ3 509 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SETD1BQ9UPS6 1966 aaKnown RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 BBOX1O75936 387 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 PARP1P09874 1014 aaKnown RBP9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CA8P35219 290 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 SUSD4Q5VX71 490 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC148Q8NFR7 591 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 HELLSQ9NRZ9 838 aa9.2□□□□□ -0.94
CTNND1-230ENST00000532245 LMTK2Q8IWU2 1503 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 TRAK2O60296 914 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 SPON1Q9HCB6 807 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 SEPT11Q9NVA2 429 aaKnown RBP9.19□□□□□ -0.94
CTNND1-230ENST00000532245 B4E1Z4 1266 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 NPR1P16066 1061 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 NFKBIBQ15653 356 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 HLFQ16534 295 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 CAMK4Q16566 473 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 CPXCR1Q8N123 301 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 APPBP2Q92624 585 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 CALML4Q96GE6 196 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 CROCC2H7BZ55 1655 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 ERVV-1B6SEH8 477 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 IDEP14735 1019 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-230ENST00000532245 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
CTNND1-230ENST00000532245 ADAMTS13Q76LX8 1427 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 MASTLQ96GX5 879 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 GPR101Q96P66 508 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-230ENST00000532245 PKD2L1Q9P0L9 805 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 RTL9Q8NET4 1388 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 APOBRQ0VD83 1088 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 CREB3L3Q68CJ9 461 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 KLHL10Q6JEL2 608 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
CTNND1-230ENST00000532245 CDK12Q9NYV4 1490 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-230ENST00000532245 SSFA2P28290 1259 aa9.18□□□□□ -0.94
CTNND1-230ENST00000532245 EDC3Q96F86 508 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms