RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
EFCAB13-213ENST00000523978 NXPE3Q969Y0 559 aa8.5□□□□□ -1.05
EFCAB13-213ENST00000523978 MYRFLQ96LU7 910 aa8.5□□□□□ -1.05
EFCAB13-213ENST00000523978 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
EFCAB13-213ENST00000523978 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
EFCAB13-213ENST00000523978 GSC2O15499 205 aa8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 TRIM42Q8IWZ5 723 aa8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 C7orf69Q9H7B7 122 aa8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 LATS2Q9NRM7 1088 aa8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 PCMTD2Q9NV79 361 aa8.49□□□□□ -1.05
EFCAB13-213ENST00000523978 EDN3P14138 238 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 USP5P45974 858 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 PREPP48147 710 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 EHHADHQ08426 723 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 VN1R5Q7Z5H4 357 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 GJD3Q8N144 294 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 BSNDQ8WZ55 320 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 RUSC1Q9BVN2 902 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 RNF208Q9H0X6 261 aa8.48□□□□□ -1.05
EFCAB13-213ENST00000523978 HMX2A2RU54 273 aa8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 TGFB1P01137 390 aa8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 CD97P48960 835 aa8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 NFIAQ12857 509 aa8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 ANKRD34AQ69YU3 496 aa8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.47□□□□□ -1.05
EFCAB13-213ENST00000523978 SART1O43290 800 aaKnown RBP8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 ARL4DP49703 201 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 IKBKEQ14164 716 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 ZDHHC13Q8IUH4 622 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 FAM20CQ8IXL6 584 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 ASAP3Q8TDY4 903 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 AMOTL2Q9Y2J4 779 aa8.46□□□□□ -1.06
EFCAB13-213ENST00000523978 MED26O95402 600 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 BMP3P12645 472 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 RNF43Q68DV7 783 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 FDX2Q6P4F2 183 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
EFCAB13-213ENST00000523978 ZBTB7CA1YPR0 619 aa8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 DBNDD2Q9BQY9 259 aa8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 ZFYVE28Q9HCC9 887 aa8.44□□□□□ -1.06
EFCAB13-213ENST00000523978 METTL12A8MUP2 240 aa8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 NEFLP07196 543 aa8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 ESRRAP11474 423 aaPredicted RBP8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 PDE4CQ08493 712 aa8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 BEND4Q6ZU67 534 aa8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 CLEC10AQ8IUN9 316 aa8.43□□□□□ -1.06
EFCAB13-213ENST00000523978 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 IGSF3O75054 1194 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 COBLO75128 1261 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 DLGAP3O95886 979 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 FAM83CQ9BQN1 747 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 EGFL7Q9UHF1 273 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 USTQ9Y2C2 406 aa8.42□□□□□ -1.06
EFCAB13-213ENST00000523978 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 H3BRB1 525 aa8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 GAS2O43903 313 aaKnown RBP8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 ICMTO60725 284 aa8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 SERPINB4P48594 390 aa8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 TUT1Q9H6E5 874 aaKnown RBP8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 HIF3AQ9Y2N7 669 aa8.41□□□□□ -1.06
EFCAB13-213ENST00000523978 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
EFCAB13-213ENST00000523978 PRR19A6NJB7 356 aa8.4□□□□□ -1.06
EFCAB13-213ENST00000523978 SGO2Q562F6 1265 aa8.4□□□□□ -1.06
EFCAB13-213ENST00000523978 NUTM2GQ5VZR2 741 aa8.4□□□□□ -1.06
EFCAB13-213ENST00000523978 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
EFCAB13-213ENST00000523978 A0A1W2PP55 124 aa8.39□□□□□ -1.07
EFCAB13-213ENST00000523978 TIAF1O95411 115 aa8.39□□□□□ -1.07
EFCAB13-213ENST00000523978 GSTM4Q03013 218 aa8.39□□□□□ -1.07
EFCAB13-213ENST00000523978 ECM1Q16610 540 aa8.39□□□□□ -1.07
EFCAB13-213ENST00000523978 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
EFCAB13-213ENST00000523978 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 C12orf50Q8NA57 414 aaPredicted RBP8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 SMG8Q8ND04 991 aaKnown RBP8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 SUGCTQ9HAC7 445 aa8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 BRPF3Q9ULD4 1205 aa8.38□□□□□ -1.07
EFCAB13-213ENST00000523978 SPINK2P20155 84 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 GRIK1P39086 918 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 GRIA4P48058 902 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 SPRED3Q2MJR0 410 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 USPL1Q5W0Q7 1092 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 CCNJLQ8IV13 435 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 MFSD14AQ96MC6 490 aa8.37□□□□□ -1.07
EFCAB13-213ENST00000523978 TCF12Q99081 682 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms