RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 FAM46AQ96IP4 442 aaKnown RBP8.8□□□□□ -1
RUFY3-215ENST00000515479 RUSC1Q9BVN2 902 aa8.8□□□□□ -1
RUFY3-215ENST00000515479 SART1O43290 800 aaKnown RBP8.79□□□□□ -1
RUFY3-215ENST00000515479 POLR3DP05423 398 aaPredicted RBP8.79□□□□□ -1
RUFY3-215ENST00000515479 VN1R5Q7Z5H4 357 aa8.79□□□□□ -1
RUFY3-215ENST00000515479 RNF208Q9H0X6 261 aa8.79□□□□□ -1
RUFY3-215ENST00000515479 ZFYVE28Q9HCC9 887 aa8.79□□□□□ -1
RUFY3-215ENST00000515479 BRPF3Q9ULD4 1205 aa8.79□□□□□ -1
RUFY3-215ENST00000515479 GSC2O15499 205 aa8.78□□□□□ -1
RUFY3-215ENST00000515479 PEAR1Q5VY43 1037 aaPredicted RBP8.78□□□□□ -1
RUFY3-215ENST00000515479 ANKRD34AQ69YU3 496 aa8.78□□□□□ -1
RUFY3-215ENST00000515479 FDX2Q6P4F2 183 aa8.78□□□□□ -1
RUFY3-215ENST00000515479 MYRFLQ96LU7 910 aa8.78□□□□□ -1
RUFY3-215ENST00000515479 BHLHE41Q9C0J9 482 aaPredicted RBP8.78□□□□□ -1
RUFY3-215ENST00000515479 SOX1O00570 391 aaPredicted RBP8.77□□□□□ -1.01
RUFY3-215ENST00000515479 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
RUFY3-215ENST00000515479 METTL12A8MUP2 240 aa8.76□□□□□ -1.01
RUFY3-215ENST00000515479 PREPP48147 710 aa8.76□□□□□ -1.01
RUFY3-215ENST00000515479 USP26Q9BXU7 913 aa8.76□□□□□ -1.01
RUFY3-215ENST00000515479 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
RUFY3-215ENST00000515479 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
RUFY3-215ENST00000515479 NDUFB5O43674 189 aa8.75□□□□□ -1.01
RUFY3-215ENST00000515479 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.75□□□□□ -1.01
RUFY3-215ENST00000515479 TRIM42Q8IWZ5 723 aa8.75□□□□□ -1.01
RUFY3-215ENST00000515479 KCNF1Q9H3M0 494 aa8.75□□□□□ -1.01
RUFY3-215ENST00000515479 PCMTD2Q9NV79 361 aa8.75□□□□□ -1.01
RUFY3-215ENST00000515479 HMX2A2RU54 273 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 GAS2O43903 313 aaKnown RBP8.74□□□□□ -1.01
RUFY3-215ENST00000515479 ESRRAP11474 423 aaPredicted RBP8.74□□□□□ -1.01
RUFY3-215ENST00000515479 BMP3P12645 472 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 SSTR4P31391 388 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 NFIAQ12857 509 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 FAM20CQ8IXL6 584 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
RUFY3-215ENST00000515479 SOX17Q9H6I2 414 aaPredicted RBP8.74□□□□□ -1.01
RUFY3-215ENST00000515479 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
RUFY3-215ENST00000515479 BEND4Q6ZU67 534 aa8.73□□□□□ -1.01
RUFY3-215ENST00000515479 ERICH6Q7L0X2 663 aa8.73□□□□□ -1.01
RUFY3-215ENST00000515479 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
RUFY3-215ENST00000515479 LOC100289279A0A1B0GTE1 492 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 A0A1W2PP55 124 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 MEGF11A6BM72 1044 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 TGFB1P01137 390 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 NEFLP07196 543 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 GSTM4Q03013 218 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 ECM1Q16610 540 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 NUTM2GQ5VZR2 741 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 CLEC10AQ8IUN9 316 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 LIN7BQ9HAP6 207 aa8.72□□□□□ -1.01
RUFY3-215ENST00000515479 A0A096LPE4 126 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 CCNJLQ8IV13 435 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 DBNDD2Q9BQY9 259 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 HIF3AQ9Y2N7 669 aa8.71□□□□□ -1.02
RUFY3-215ENST00000515479 PCDH1Q08174 1060 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 TXNDC2Q86VQ3 553 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 ZDHHC13Q8IUH4 622 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 C12orf50Q8NA57 414 aaPredicted RBP8.7□□□□□ -1.02
RUFY3-215ENST00000515479 TCF12Q99081 682 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 FAM83CQ9BQN1 747 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 TMPRSS13Q9BYE2 586 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 CLEC4MQ9H2X3 399 aaPredicted RBP8.7□□□□□ -1.02
RUFY3-215ENST00000515479 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
RUFY3-215ENST00000515479 COBLO75128 1261 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 DLGAP3O95886 979 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 RXRBP28702 533 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 GRIA4P48058 902 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 CD97P48960 835 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 PDE4CQ08493 712 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 ORC1Q13415 861 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
RUFY3-215ENST00000515479 CPNE3O75131 537 aaKnown RBP8.68□□□□□ -1.02
RUFY3-215ENST00000515479 SGO2Q562F6 1265 aa8.68□□□□□ -1.02
RUFY3-215ENST00000515479 SMG8Q8ND04 991 aaKnown RBP8.68□□□□□ -1.02
RUFY3-215ENST00000515479 TMC1Q8TDI8 760 aa8.68□□□□□ -1.02
RUFY3-215ENST00000515479 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
RUFY3-215ENST00000515479 SUGCTQ9HAC7 445 aa8.68□□□□□ -1.02
RUFY3-215ENST00000515479 NPHS2Q9NP85 383 aa8.68□□□□□ -1.02
RUFY3-215ENST00000515479 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
RUFY3-215ENST00000515479 TIAF1O95411 115 aa8.67□□□□□ -1.02
RUFY3-215ENST00000515479 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
RUFY3-215ENST00000515479 CCER1Q8TC90 406 aaPredicted RBP8.67□□□□□ -1.02
RUFY3-215ENST00000515479 PSMG3-AS1Q96PY0 264 aa8.67□□□□□ -1.02
RUFY3-215ENST00000515479 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
RUFY3-215ENST00000515479 EHD4Q9H223 541 aa8.67□□□□□ -1.02
RUFY3-215ENST00000515479 MED26O95402 600 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 GRIK1P39086 918 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 ZNF423Q2M1K9 1284 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
RUFY3-215ENST00000515479 KIAA0319Q5VV43 1072 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 SHKBP1Q8TBC3 707 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
RUFY3-215ENST00000515479 GPR182O15218 404 aa8.65□□□□□ -1.02
RUFY3-215ENST00000515479 DRD2P14416 443 aa8.65□□□□□ -1.02
RUFY3-215ENST00000515479 MFSD14AQ96MC6 490 aa8.65□□□□□ -1.02
RUFY3-215ENST00000515479 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
RUFY3-215ENST00000515479 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms