RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
RUFY3-215ENST00000515479 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
RUFY3-215ENST00000515479 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
RUFY3-215ENST00000515479 PHF23Q9BUL5 403 aaPredicted RBP24.91■■□□□ 1.58
RUFY3-215ENST00000515479 FOXD1Q16676 465 aa23.41■■□□□ 1.34
RUFY3-215ENST00000515479 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
RUFY3-215ENST00000515479 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
RUFY3-215ENST00000515479 ADRA2BP18089 450 aa22.12■■□□□ 1.13
RUFY3-215ENST00000515479 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
RUFY3-215ENST00000515479 MSH5O43196 834 aa21.79■■□□□ 1.08
RUFY3-215ENST00000515479 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
RUFY3-215ENST00000515479 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
RUFY3-215ENST00000515479 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
RUFY3-215ENST00000515479 PPP4R3CPQ6ZMV5 832 aa20.1■□□□□ 0.81
RUFY3-215ENST00000515479 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
RUFY3-215ENST00000515479 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
RUFY3-215ENST00000515479 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
RUFY3-215ENST00000515479 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
RUFY3-215ENST00000515479 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
RUFY3-215ENST00000515479 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
RUFY3-215ENST00000515479 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
RUFY3-215ENST00000515479 KCNA4P22459 653 aa19.1■□□□□ 0.65
RUFY3-215ENST00000515479 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
RUFY3-215ENST00000515479 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
RUFY3-215ENST00000515479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
RUFY3-215ENST00000515479 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
RUFY3-215ENST00000515479 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
RUFY3-215ENST00000515479 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
RUFY3-215ENST00000515479 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
RUFY3-215ENST00000515479 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
RUFY3-215ENST00000515479 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
RUFY3-215ENST00000515479 CAPN15O75808 1086 aa17.78■□□□□ 0.44
RUFY3-215ENST00000515479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
RUFY3-215ENST00000515479 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
RUFY3-215ENST00000515479 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
RUFY3-215ENST00000515479 APLP2Q06481 763 aa17.72■□□□□ 0.43
RUFY3-215ENST00000515479 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
RUFY3-215ENST00000515479 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
RUFY3-215ENST00000515479 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
RUFY3-215ENST00000515479 DSG3P32926 999 aa17.55■□□□□ 0.4
RUFY3-215ENST00000515479 ZBTB22O15209 634 aa17.54■□□□□ 0.4
RUFY3-215ENST00000515479 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
RUFY3-215ENST00000515479 ABCB7O75027 752 aa17.4■□□□□ 0.38
RUFY3-215ENST00000515479 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
RUFY3-215ENST00000515479 POLA2Q14181 598 aa17.16■□□□□ 0.34
RUFY3-215ENST00000515479 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
RUFY3-215ENST00000515479 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
RUFY3-215ENST00000515479 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
RUFY3-215ENST00000515479 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
RUFY3-215ENST00000515479 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
RUFY3-215ENST00000515479 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
RUFY3-215ENST00000515479 FBLN2P98095 1184 aa16.61■□□□□ 0.25
RUFY3-215ENST00000515479 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
RUFY3-215ENST00000515479 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
RUFY3-215ENST00000515479 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
RUFY3-215ENST00000515479 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
RUFY3-215ENST00000515479 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
RUFY3-215ENST00000515479 POTEHQ6S545 545 aa16.28■□□□□ 0.2
RUFY3-215ENST00000515479 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
RUFY3-215ENST00000515479 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
RUFY3-215ENST00000515479 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
RUFY3-215ENST00000515479 SSUH2Q9Y2M2 353 aa16.15■□□□□ 0.18
RUFY3-215ENST00000515479 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
RUFY3-215ENST00000515479 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
RUFY3-215ENST00000515479 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
RUFY3-215ENST00000515479 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
RUFY3-215ENST00000515479 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
RUFY3-215ENST00000515479 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
RUFY3-215ENST00000515479 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
RUFY3-215ENST00000515479 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
RUFY3-215ENST00000515479 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
RUFY3-215ENST00000515479 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
RUFY3-215ENST00000515479 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
RUFY3-215ENST00000515479 HAX1O00165 279 aa15.58■□□□□ 0.08
RUFY3-215ENST00000515479 PROM2Q8N271 834 aa15.52■□□□□ 0.08
RUFY3-215ENST00000515479 FKBP8Q14318 412 aa15.49■□□□□ 0.07
RUFY3-215ENST00000515479 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
RUFY3-215ENST00000515479 CREBZFQ9NS37 354 aa15.4■□□□□ 0.06
RUFY3-215ENST00000515479 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
RUFY3-215ENST00000515479 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
RUFY3-215ENST00000515479 EVX2Q03828 476 aa15.36■□□□□ 0.05
RUFY3-215ENST00000515479 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
RUFY3-215ENST00000515479 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
RUFY3-215ENST00000515479 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
RUFY3-215ENST00000515479 MIER1Q8N108 512 aa15.14■□□□□ 0.01
RUFY3-215ENST00000515479 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
RUFY3-215ENST00000515479 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
RUFY3-215ENST00000515479 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
RUFY3-215ENST00000515479 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
RUFY3-215ENST00000515479 GABBR2O75899 941 aa15.05■□□□□ -0
RUFY3-215ENST00000515479 FBXO3Q9UK99 471 aa15.05■□□□□ -0
RUFY3-215ENST00000515479 ZNF579Q8NAF0 562 aaKnown RBP15□□□□□ -0.01
RUFY3-215ENST00000515479 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
RUFY3-215ENST00000515479 CLCN6P51797 869 aa14.92□□□□□ -0.02
RUFY3-215ENST00000515479 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
RUFY3-215ENST00000515479 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
RUFY3-215ENST00000515479 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
RUFY3-215ENST00000515479 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
RUFY3-215ENST00000515479 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
RUFY3-215ENST00000515479 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms