RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ZNF804BA4D1E1 1349 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 ELP1O95163 1332 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 PNPLA7Q6ZV29 1317 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 FGAP02671 866 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 XRCC6P12956 609 aaKnown RBP eCLIP10.91□□□□□ -0.66
HTT-205ENST00000509043 PDE6AP16499 860 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
HTT-205ENST00000509043 KRT85P78386 507 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 CHRNDQ07001 517 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 TRDNQ13061 729 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 CAVIN1Q6NZI2 390 aaKnown RBP10.91□□□□□ -0.66
HTT-205ENST00000509043 TPTE2Q6XPS3 522 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 RALYLQ86SE5 291 aaKnown RBP10.91□□□□□ -0.66
HTT-205ENST00000509043 SMARCC2Q8TAQ2 1214 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 GPT2Q8TD30 523 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 ANP32BQ92688 251 aaKnown RBP10.91□□□□□ -0.66
HTT-205ENST00000509043 BRF1Q92994 677 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 MTA3Q9BTC8 594 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 ANKRD2Q9GZV1 360 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
HTT-205ENST00000509043 TAF6LQ9Y6J9 622 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 LY75O60449 1722 aa10.91□□□□□ -0.66
HTT-205ENST00000509043 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 IDH1O75874 414 aaKnown RBP10.9□□□□□ -0.66
HTT-205ENST00000509043 CAVIN4Q5BKX8 364 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 NAA16Q6N069 864 aaPredicted RBP10.9□□□□□ -0.66
HTT-205ENST00000509043 USP48Q86UV5 1035 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 NECAB1Q8N987 351 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 AIDAQ96BJ3 306 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 NACAP1Q9BZK3 213 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
HTT-205ENST00000509043 SCAND2PQ9GZW5 306 aaPredicted RBP10.9□□□□□ -0.66
HTT-205ENST00000509043 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.66
HTT-205ENST00000509043 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 DOCK2Q92608 1830 aa10.9□□□□□ -0.66
HTT-205ENST00000509043 ZNF532Q9HCE3 1301 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
HTT-205ENST00000509043 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
HTT-205ENST00000509043 GNPATO15228 680 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 CHGBP05060 677 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 RASGRF1Q13972 1273 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 SLC27A3Q5K4L6 730 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 LRSAM1Q6UWE0 723 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
HTT-205ENST00000509043 FAM184AQ8NB25 1140 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 STRBPQ96SI9 672 aaKnown RBP10.89□□□□□ -0.67
HTT-205ENST00000509043 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
HTT-205ENST00000509043 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 DENND2AQ9ULE3 1009 aa10.89□□□□□ -0.67
HTT-205ENST00000509043 AFF2P51816 1311 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 FAM177BA6PVY3 158 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 FOXP2O15409 715 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 NT5C2P49902 561 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 SCRN1Q12765 414 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
HTT-205ENST00000509043 TBC1D9BQ66K14 1250 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 PI16Q6UXB8 463 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 MB21D2Q8IYB1 491 aaPredicted RBP10.88□□□□□ -0.67
HTT-205ENST00000509043 HELBQ8NG08 1087 aaPredicted RBP10.88□□□□□ -0.67
HTT-205ENST00000509043 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
HTT-205ENST00000509043 TMEM87BQ96K49 555 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 TCEANC2Q96MN5 208 aa10.88□□□□□ -0.67
HTT-205ENST00000509043 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 H3BQV1 296 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 PRC1O43663 620 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 CDKL5O76039 1030 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
HTT-205ENST00000509043 RPS8P62241 208 aaKnown RBP10.87□□□□□ -0.67
HTT-205ENST00000509043 CCDC183Q5T5S1 534 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 NSUN7Q8NE18 718 aaKnown RBP10.87□□□□□ -0.67
HTT-205ENST00000509043 KRT23Q9C075 422 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 CFAP45Q9UL16 551 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 MINPP1Q9UNW1 487 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 C4BP0C0L5 1744 aa10.87□□□□□ -0.67
HTT-205ENST00000509043 SALL1Q9NSC2 1324 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 TAF1LQ8IZX4 1826 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 APPP05067 770 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 PCP11498 1178 aaKnown RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 RFC4P35249 363 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 NASPP49321 788 aaPredicted RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 RCAN1P53805 252 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 STK3Q13188 491 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 TTLL5Q6EMB2 1281 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 GAS2L3Q86XJ1 694 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 SEPT12Q8IYM1 358 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 MAGEB6Q8N7X4 407 aa10.86□□□□□ -0.67
HTT-205ENST00000509043 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
HTT-205ENST00000509043 NAPBQ9H115 298 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms