RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 ZNF830Q96NB3 372 aaPredicted RBP5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 PHLPP1O60346 1717 aa5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 NWD2Q9ULI1 1742 aa5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 WDR33Q9C0J8 1336 aaKnown RBP5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 USP34Q70CQ2 3546 aa5.47□□□□□ -1.53
ATP2C1-212ENST00000507488 LAMB4A4D0S4 1761 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 SPEF2Q9C093 1822 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 E7EWF7 191 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 PRDM1O75626 825 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 NTSR2O95665 410 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 PCCAP05165 728 aaPredicted RBP5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 LIG1P18858 919 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 RPS6KB1P23443 525 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 PTPN21Q16825 1174 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 TTC39AQ5SRH9 613 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 GORABQ5T7V8 394 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 SLC9C2Q5TAH2 1124 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 KLHL34Q8N239 644 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 ARMT1Q9H993 441 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 EPB41L4AQ9HCS5 686 aaPredicted RBP5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 CCDC87Q9NVE4 849 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 HMG20BQ9P0W2 317 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 CEP126Q9P2H0 1117 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 HDAC5Q9UQL6 1122 aa5.46□□□□□ -1.53
ATP2C1-212ENST00000507488 NUP98P52948 1817 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 GNPATO15228 680 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 MSNP26038 577 aaKnown RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 DYNLL1P63167 89 aaKnown RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 NFIXQ14938 502 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 ATP2B3Q16720 1220 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 MCMDC2Q4G0Z9 681 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 ILDR1Q86SU0 546 aaPredicted RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 ERC1Q8IUD2 1116 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 RUFY2Q8WXA3 655 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 GPATCH3Q96I76 525 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 USP21Q9UK80 565 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 BAZ2BQ9UIF8 2168 aaKnown RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 STX6O43752 255 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 NEDD4P46934 1319 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 TTC6Q86TZ1 520 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 SYAP1Q96A49 352 aaPredicted RBP5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 PDLIM2Q96JY6 352 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 ZNF532Q9HCE3 1301 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 CYP46A1Q9Y6A2 500 aa5.46□□□□□ -1.54
ATP2C1-212ENST00000507488 GPAA1O43292 621 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 NMT2O60551 498 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 FDPSP14324 419 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 IL15P40933 162 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ZMYM1Q5SVZ6 1142 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 LCORLQ8N3X6 602 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 PHKBQ93100 1093 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 BCL11BQ9C0K0 894 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 MRVI1Q9Y6F6 885 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 JCADQ9P266 1359 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 B4E1Z4 1266 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 PDE8BO95263 885 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 HSP90B1P14625 803 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ADD1P35611 737 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 CHRNDQ07001 517 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 NOM1Q5C9Z4 860 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 BLOC1S2Q6QNY1 142 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 MAGEB6Q8N7X4 407 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 PIBF1Q8WXW3 757 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 SHISA4Q96DD7 197 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 MXD3Q9BW11 206 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ABCF2Q9UG63 623 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 TRIM37O94972 964 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 ARHGEF1Q92888 912 aaKnown RBP5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 KCNB2Q92953 911 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 NEK1Q96PY6 1258 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 TSPY26PQ9H489 355 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 SMC3Q9UQE7 1217 aa5.45□□□□□ -1.54
ATP2C1-212ENST00000507488 AKAP11Q9UKA4 1901 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 LAMA4Q16363 1823 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 CARMIL3Q8ND23 1372 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 TCRBV5S4A2TA0A5A2 114 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 RNF113AO15541 343 aaKnown RBP5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 APPP05067 770 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 CYP2D6P10635 497 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 CDC27P30260 824 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 PROM2Q8N271 834 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 PGBD1Q96JS3 809 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 NOL7Q9UMY1 257 aaKnown RBP5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 HPS5Q9UPZ3 1129 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 NRAPQ86VF7 1730 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 KIF28PB7ZC32 967 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 F13A1P00488 732 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 POLR3DP05423 398 aaPredicted RBP5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 RRP12Q5JTH9 1297 aaKnown RBP5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 MSL1Q68DK7 614 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 TMEM87AQ8NBN3 555 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 PCDHAC2Q9Y5I4 1007 aa5.44□□□□□ -1.54
ATP2C1-212ENST00000507488 ANKRD18BA2A2Z9 1011 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms