RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 TCRBV5S4A2TA0A5A2 114 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ZNF213O14771 459 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 FGAP02671 866 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 XRCC6P12956 609 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL1A1-210ENST00000504289 PDE6AP16499 860 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 MCM5P33992 734 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 UBE2HP62256 183 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ATL3Q6DD88 541 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 NCOA7Q8NI08 942 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ANKRD2Q9GZV1 360 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ZSCAN16Q9H4T2 348 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-210ENST00000504289 CCNL1Q9UK58 526 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-210ENST00000504289 TAF6LQ9Y6J9 622 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 ELP1O95163 1332 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
COL1A1-210ENST00000504289 CHRNDQ07001 517 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 TRDNQ13061 729 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 ZSCAN23Q3MJ62 389 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
COL1A1-210ENST00000504289 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-210ENST00000504289 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 BRF1Q92994 677 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 SCAND2PQ9GZW5 306 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-210ENST00000504289 PUS7LQ9H0K6 701 aaKnown RBP11.57□□□□□ -0.56
COL1A1-210ENST00000504289 PIH1D3Q9NQM4 214 aaKnown RBP11.57□□□□□ -0.56
COL1A1-210ENST00000504289 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
COL1A1-210ENST00000504289 PATL2C9JE40 543 aaKnown RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 FOXP2O15409 715 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 IDH1O75874 414 aaKnown RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 NT5C2P49902 561 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 RASGRF1Q13972 1273 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 CAVIN4Q5BKX8 364 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 CAVIN1Q6NZI2 390 aaKnown RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 MB21D2Q8IYB1 491 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 NECAB1Q8N987 351 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
COL1A1-210ENST00000504289 CNNM2Q9H8M5 875 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 AFF2P51816 1311 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
COL1A1-210ENST00000504289 CHGBP05060 677 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 RPS8P62241 208 aaKnown RBP11.55□□□□□ -0.56
COL1A1-210ENST00000504289 KRT85P78386 507 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 LRSAM1Q6UWE0 723 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-210ENST00000504289 ANP32BQ92688 251 aaKnown RBP11.55□□□□□ -0.56
COL1A1-210ENST00000504289 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 NACAP1Q9BZK3 213 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 DENND2AQ9ULE3 1009 aa11.55□□□□□ -0.56
COL1A1-210ENST00000504289 GNPATO15228 680 aa11.54□□□□□ -0.56
COL1A1-210ENST00000504289 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
COL1A1-210ENST00000504289 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
COL1A1-210ENST00000504289 TRAPPC3LQ5T215 181 aa11.54□□□□□ -0.56
COL1A1-210ENST00000504289 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
COL1A1-210ENST00000504289 FAM184AQ8NB25 1140 aa11.54□□□□□ -0.56
COL1A1-210ENST00000504289 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-210ENST00000504289 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
COL1A1-210ENST00000504289 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
COL1A1-210ENST00000504289 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-210ENST00000504289 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 PRC1O43663 620 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 RFC4P35249 363 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 RCAN1P53805 252 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 SCRN1Q12765 414 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 FOXD4L5Q5VV16 416 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-210ENST00000504289 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 FAM196AQ6ZSG2 479 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 SEPT12Q8IYM1 358 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 NSUN7Q8NE18 718 aaKnown RBP11.53□□□□□ -0.56
COL1A1-210ENST00000504289 FOXD4L4Q8WXT5 416 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-210ENST00000504289 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
COL1A1-210ENST00000504289 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 KRT23Q9C075 422 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
COL1A1-210ENST00000504289 C4BP0C0L5 1744 aa11.52□□□□□ -0.56
COL1A1-210ENST00000504289 H3BQV1 296 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 CDKL5O76039 1030 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 LIFRP42702 1097 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 BCAMP50895 628 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
COL1A1-210ENST00000504289 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms