RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 ARFGAP3Q9NP61 516 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 EXOC1Q9NV70 894 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 CYLC1P35663 651 aaPredicted RBP18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 VAT1LQ9HCJ6 419 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 SH3TC1Q8TE82 1336 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 TMCO5BA8MYB1 307 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 AKR1B10O60218 316 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 SYT1P21579 422 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 GOPCQ9HD26 462 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 SLU7O95391 586 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 CCDC91Q7Z6B0 441 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 CALM1P0DP23 149 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CALM2P0DP24 149 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CALM3P0DP25 149 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 TCERG1LQ5VWI1 586 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 PPP4R3AQ6IN85 833 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 LMAN1P49257 510 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 STXBP4Q6ZWJ1 553 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CTAGE15A4D2H0 777 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CTAGE8P0CG41 777 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 AFMP43652 599 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CTAGE6Q86UF2 777 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 CTAGE4Q8IX94 777 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 USP19O94966 1318 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 SMC1AQ14683 1233 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 DHX32Q7L7V1 743 aaKnown RBP18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
HMGXB3-202ENST00000503427 ATL3Q6DD88 541 aa18.41■□□□□ 0.54
HMGXB3-202ENST00000503427 BCCIPQ9P287 314 aaKnown RBP eCLIP18.41■□□□□ 0.54
HMGXB3-202ENST00000503427 IFI16Q16666 785 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-202ENST00000503427 ZCCHC11Q5TAX3 1644 aaKnown RBP18.41■□□□□ 0.54
HMGXB3-202ENST00000503427 HELBQ8NG08 1087 aaPredicted RBP18.41■□□□□ 0.54
HMGXB3-202ENST00000503427 STAT6P42226 847 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 NOP2P46087 812 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 BRAPQ7Z569 592 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 TFCP2L1Q9NZI6 479 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 FAM89AQ96GI7 184 aa18.4■□□□□ 0.54
HMGXB3-202ENST00000503427 RNF187Q5TA31 235 aaPredicted RBP18.39■□□□□ 0.54
HMGXB3-202ENST00000503427 GIMAP7Q8NHV1 300 aa18.39■□□□□ 0.54
HMGXB3-202ENST00000503427 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.54
HMGXB3-202ENST00000503427 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.54
HMGXB3-202ENST00000503427 PTPDC1A2A3K4 754 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 CCDC175P0C221 793 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 LMOD1P29536 600 aaPredicted RBP18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 PSMA7O14818 248 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 GNPATO15228 680 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 PDE8AO60658 829 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 CHD1O14646 1710 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 EYA3Q99504 573 aa18.39■□□□□ 0.53
HMGXB3-202ENST00000503427 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 TNNI3KQ59H18 835 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 FPGT-TNNI3KV9GXZ4 949 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 CEP112Q8N8E3 955 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 DENND2AQ9ULE3 1009 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 A0A1B0GUL7 405 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 PTGS1P23219 599 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 TUBB4BP68371 445 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 SLC4A8Q2Y0W8 1093 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 ATP7BP35670 1465 aa18.38■□□□□ 0.53
HMGXB3-202ENST00000503427 MAATS1Q7Z4T9 603 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 CTNNBL1Q8WYA6 563 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 ITGA6P23229 1130 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 DNAI2Q9GZS0 605 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 KDM6BO15054 1643 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 METP08581 1390 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 GCKRQ14397 625 aa18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
HMGXB3-202ENST00000503427 LDHBP07195 334 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 LIG1P18858 919 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 PUM3Q15397 648 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 HSF2BPO75031 334 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 CALML3P27482 149 aa18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 PRPF4BQ13523 1007 aaKnown RBP18.36■□□□□ 0.53
HMGXB3-202ENST00000503427 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms